ggKbase home page

OR_07182017_22_scaffold_140_25

Organism: OR_07182017_22_Halothiobacillus_neapolitanus_53_58

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(25077..25535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L017_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 123.0
  • Bit_score: 175
  • Evalue 3.30e-41
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 123.0
  • Bit_score: 175
  • Evalue 9.50e-42
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 175
  • Evalue 3.60e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACAGAACAGTCAGAACTCAGTACGAACGAAAGGATGTTGCACGGCTTACTGCTGCAAAGCCTCAAGGGCAATACCGGCACGTACCAGCAATTTCTTAAGGAATTGGCGCGCCTGCTGCGGGGCTATTTTCGGCGCCGATTAACCGCGCTACCGGATGAGGTTGAAGATTTGGTGCAAGAATCCCTATTGGCAATCCACAACAAGCGCCACACCTATGATGCGACGCAACCCGTGACCGCCTGGATTTATGCGATCGCAAAGTACAAGTTGATTGACCTCATGAGACGCCGCGAACGGCAAGATCAATGGAACGACCCCTTTGATGAAGCCTATGAGTTTTCGACCCCCTCAGAAGAAGAGGCGACAGATGCCAAAAGGGATGTGCACCTGCTGCTCAAACAACTGCCCGATCGCATGCGACTGCCCATTATTCACACCAGCTCTCTTTTGGCCTGA
PROTEIN sequence
Length: 153
MTEQSELSTNERMLHGLLLQSLKGNTGTYQQFLKELARLLRGYFRRRLTALPDEVEDLVQESLLAIHNKRHTYDATQPVTAWIYAIAKYKLIDLMRRRERQDQWNDPFDEAYEFSTPSEEEATDAKRDVHLLLKQLPDRMRLPIIHTSSLLA*