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OR_07182017_23_scaffold_87_35

Organism: OR_07182017_23_Halothiobacillus_neapolitanus_53_185

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 2
Location: comp(35528..36091)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CW0_DECAR similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 186.0
  • Bit_score: 217
  • Evalue 9.50e-54
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 186.0
  • Bit_score: 217
  • Evalue 2.70e-54
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 185.0
  • Bit_score: 231
  • Evalue 8.90e-58

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACAGAACAGTCAGAACTCAGTACGAACGAAAGGATGTTGCACGGCTTACTGCTGCAAAGCCTCAAGGGCAATACCGGCACGTACCAGCAATTTCTTAAGGAATTGGCGCGCCTGCTGCGGGGCTATTTTCGGCGCCGATTAACCGCGCTACCGGATGAGGTTGAAGATTTGGTGCAAGAATCCCTATTGGCAATCCACAACAAGCGCCACACCTATGATGCGACGCAACCCGTGACCGCCTGGATTTATGCGATCGCAAAGTACAAGTTGATTGACCTCATGAGACGCCGCGAACGGCAAGATCAATGGAACGACCCCTTTGATGAAGCCTATGAGTTTTCGACCCCCTCAGAAGAAGAGGCGACAGATGCCAAAAGGGATGTGCACCTGCTGCTCAAACAACTGCCCGATCGCATGCGACTGCCCATTATTCACACCAAGCTTGAAGGCTTATCTGTGGCTGAAGCGGCGCACCGCACCGGGCTCACAGAATCGGCGGTCAAAGTGGGCGTCCACCGTGGTCTCAAAGCACTGCATGCATTATTACGAGGTACACCATGA
PROTEIN sequence
Length: 188
MTEQSELSTNERMLHGLLLQSLKGNTGTYQQFLKELARLLRGYFRRRLTALPDEVEDLVQESLLAIHNKRHTYDATQPVTAWIYAIAKYKLIDLMRRRERQDQWNDPFDEAYEFSTPSEEEATDAKRDVHLLLKQLPDRMRLPIIHTKLEGLSVAEAAHRTGLTESAVKVGVHRGLKALHALLRGTP*