ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

OR_07182017_23_scaffold_1453_4

Organism: OR_07182017_23_Bacteroidetes_38_5

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 4 ASCG 12 / 38
Location: comp(1344..1976)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 207.0
  • Bit_score: 141
  • Evalue 7.40e-31
3-hydroxyacyl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 207.0
  • Bit_score: 141
  • Evalue 2.10e-31
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 202.0
  • Bit_score: 162
  • Evalue 5.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 633
ATGCAAATCTTAGTCAAAGCAAACCCAAGTCAAAAAGCCCATTTTGCAGCATTACCCTTTGCGGCAAATGCCACCATATTTTGGCATGACCAAGATCCGGATAAACAAGTAGACGCTTATTTTGACCTTTGTTATGAGGAAGAAGGACCCTGTTTTTCTTGGGTGCATCACCAACCCATTTTTGTCAATGCCTTGACTGCTTCTTCGGATTCCTTGCCTGAAAATACTATCCGGATCAATGGATGGGATGGTTTTTTAGAGAGAAAGATTTGGGAATTGGGGAATGATCATCCCAACCATCGCGCCAAAGCGCAAAAGGTTTTAGAAAACCTGCAACAAGAATTTATATGGGTGCCTAATGAACCTGGTTTAGTGGCGGCTAGGGTGATTGCCATGATTATCAATGAGGCCTATTTTGCCTTTGGCGATGGCGTAAGTTCTAAAGTCGATATGGATACTGCTATGAAATTGGGGACCAATTATCCCTTTGGTCCCTTTGAATGGGCTGAAAAAATAGGACTGCCCAAGATCTTGTCATTGCTGCAAGCACTTGAGAAAAACAATGCTAGATACCAGCCTGCACCTGAAATGATAAGGGAACTAACCGAACAGTTGAAAAAACCTATTTCTTAA
PROTEIN sequence
Length: 211
MQILVKANPSQKAHFAALPFAANATIFWHDQDPDKQVDAYFDLCYEEEGPCFSWVHHQPIFVNALTASSDSLPENTIRINGWDGFLERKIWELGNDHPNHRAKAQKVLENLQQEFIWVPNEPGLVAARVIAMIINEAYFAFGDGVSSKVDMDTAMKLGTNYPFGPFEWAEKIGLPKILSLLQALEKNNARYQPAPEMIRELTEQLKKPIS*