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OR_07182017_23_scaffold_410_3

Organism: OR_07182017_23_Bacteroidetes_38_5

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 4 ASCG 12 / 38
Location: comp(1961..2842)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 276.0
  • Bit_score: 433
  • Evalue 1.00e-118
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 276.0
  • Bit_score: 453
  • Evalue 1.70e-124
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 276.0
  • Bit_score: 433
  • Evalue 2.90e-119

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
GTGGCCCCTCCCTCCCCACCCGTAGTCAGAACTTTTCGGATACTTATACCAAGGGAATCCCAAAGTCTGGAAAAATACCTGCAAGAAATTGGTAAGGTAGAACTGATTTCTCCTGAACAGGAGGTGGAATTGGCATTGAAAATCAAGAACGGAGACCAACGGGCTTTGGACCGATTGGTTAAATCTAACCTACGTTTTGTGGTTTCTGTGGCCAAACAGTACCAAAATCAAGGATTGACCCTGCCAGACCTGATTAATGAAGGCAACCTAGGTTTAATCAAAGCCGCTTTGCGATTTGACGAGACCAGGGGATTCAAATTCATTTCTTATGCTGTTTGGTGGATCAGACAAAGCATTTTACAGTCATTGGCAGAACAGAGCCGGATTGTGCGACTACCGCTGAACAAAGTGGGGCTCACCAACCGAATTAGCAAAGCCTATCAACAGCTAGAACAGGAATATGAAAGAGAGCCCAGCCCAGAAGAATTGGCCGAGCTCTTAGACCTTGGTATTGATGAAGTAACCGCCACTATGAATGTGGGATTCCGCCACGTAAGCATGGATACACCGCTCTCAGACGGGGAAGACGGTACCCTCATGGACCTAATGGAGAACCCCAATGCAGTCAAAACAGACGAGAAACTGGAGCATTTTGAATCGCTCCGCATGGAAATAGAGCGCAGTTTGCGTACCCTCACTGAGCGCCAAAAAGACGTGGTTTGCTTCTTTTTTGGCATTGGTGTAGACCATCCCTTGAGTTTAGAAGATATTGGAGAGCGTTATAACCTGACCCGAGAAAGGGTGCGCCAAATCAAGGACAAAGCCATTACCAAACTCCGCTCTACCAATAGATGTAAGCAGTTAAGGGTTTACTTAGGTTGA
PROTEIN sequence
Length: 294
VAPPSPPVVRTFRILIPRESQSLEKYLQEIGKVELISPEQEVELALKIKNGDQRALDRLVKSNLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAALRFDETRGFKFISYAVWWIRQSILQSLAEQSRIVRLPLNKVGLTNRISKAYQQLEQEYEREPSPEELAELLDLGIDEVTATMNVGFRHVSMDTPLSDGEDGTLMDLMENPNAVKTDEKLEHFESLRMEIERSLRTLTERQKDVVCFFFGIGVDHPLSLEDIGERYNLTRERVRQIKDKAITKLRSTNRCKQLRVYLG*