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OR_07182017_23_scaffold_415_3

Organism: OR_07182017_23_Bacteroidetes_38_5

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 4 ASCG 12 / 38
Location: 2057..2515

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJP1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 141.0
  • Bit_score: 133
  • Evalue 1.10e-28
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 141.0
  • Bit_score: 133
  • Evalue 3.20e-29
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU63801.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 141.0
  • Bit_score: 133
  • Evalue 1.60e-28

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 459
ATGGAGGATTATCAAGAAGCTGTTTCCGTTACCAATGACAGTTTTGTAAAAGCATTTTTACGTCTCAACCAGTTTGAAATAGACAGTAATAATCAGATTCTAGAATTGCGTTTTAGAGGTTGGCTTAGAAGGATTACGGTAAATGAATCTATAGATCAAATTAGGAAAAGAAAAAGAGAGACAAAATTTGAATCCTTACATGAAAATGACTGGATAGACCAAGCTTCCACTGATCAAGCAGATTCCAAACTACTTTATAAAGAATTAATTAGCTATATGAAGGAGTTGCCACCAAGTTATCAAAAGGTTTTTAACCTATATGTGATTGATGGATTTAGTCATGCTGAGATTGCTATTATGCTAGAAATTTCTGTTGGAACCTCCAAATCAAATCTATCCAGGGCAAAGGATTTTCTACAGAATAAAATTGTGGAATTTTTTGAAACAAAGAAATCATGA
PROTEIN sequence
Length: 153
MEDYQEAVSVTNDSFVKAFLRLNQFEIDSNNQILELRFRGWLRRITVNESIDQIRKRKRETKFESLHENDWIDQASTDQADSKLLYKELISYMKELPPSYQKVFNLYVIDGFSHAEIAIMLEISVGTSKSNLSRAKDFLQNKIVEFFETKKS*