ggKbase home page

OR_07182017_23_scaffold_4194_1

Organism: OR_07182017_23_Bacteroidetes_38_5

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 4 ASCG 12 / 38
Location: comp(3..449)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F016_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 146.0
  • Bit_score: 146
  • Evalue 2.10e-32
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 146.0
  • Bit_score: 146
  • Evalue 6.00e-33
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AFK05269.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 146.0
  • Bit_score: 146
  • Evalue 3.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 447
ATGCCTAGAGTAAGTTGTCCAAAATGTAACAAAGTAGAAACAATTCAGAAATCCGGAATTGTTAGAAATAAACAACGTTTTTATTGCAAGGACTGCAATTACAATTTTACTATTCATCATGAAAGTAACAAACAAAAAGCAAGGTCAAAAACTAGCACTTCATTACAAACATCTTTACAAGATATTGCAAAAGCAATTGGGATATCTGTCTCTACTGTTTCAAGAGCATTACATAACCATCCAGACATTAGCGTAAAAACAAAAAATGCTGTTCAAAAATTAGCCAATGAATTATCTTACCAACCCAATGCATTAGCACAAAGTTTGGTAACAAAATCAACACATACTTTAGGTGTAATCATTCCAAACCTTGAAACAACCTTCTTTTCTTCCATGCTAAGTGGTATTCAACACGTTGCCGCAAAAGCAGGTTATAGAGTTGTTATT
PROTEIN sequence
Length: 149
MPRVSCPKCNKVETIQKSGIVRNKQRFYCKDCNYNFTIHHESNKQKARSKTSTSLQTSLQDIAKAIGISVSTVSRALHNHPDISVKTKNAVQKLANELSYQPNALAQSLVTKSTHTLGVIIPNLETTFFSSMLSGIQHVAAKAGYRVVI