ggKbase home page

OR_07242016_13_scaffold_35_28

Organism: OR_07242016_13_Halothiobacillus_neapolitanus_53_149

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(32785..33336)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 3.00e-74
Pseudouridine synthase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVP6_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 2.10e-74
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 6.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACCCAGCTCATTGCCTTTAACAAACCCTTTAATGTGCTCTCACAATTTACTGCAGAGCCGGGTTCTACCGCCCAAACACTGGCCGATTTTATCGACTTGCCGAACGTGTATGCAGCAGGCCGCCTTGATCGAGACTCTGAAGGCTTGCTGCTCCTAACCGATGATGGTCGCCTGCAAGCTAAGCTTGCCCACCCCGAGTTCAAGCAACCCAAAACCTATTTGGCTCAAGTGGAAGGCGACATCACCGCGCAGGCGCTAAGGCAACTTCAGCACGGCGTGGTGTTAAATGATGGCAAAACGCGCCCCGCGATTGCGCAAGCAATCCCCGAACCGGATTGGCTTTGGCCGCGCACCCCGCCGATTCGTGCGCGGCAGGCCATCCCCACCCATTGGTTGGAACTCACCATTACCGAAGGCAAAAATCGCCAAGTGCGCCGCATGACCGCCGCTGTAGGGCTCCCCACCTTGCGCCTAATTCGCGTTCAAATTGGTGATTATGCGCTGGGCGATTTGGCGCAAGGGCAATGGCGGCATTTGGGGGGCATTTAA
PROTEIN sequence
Length: 184
MTQLIAFNKPFNVLSQFTAEPGSTAQTLADFIDLPNVYAAGRLDRDSEGLLLLTDDGRLQAKLAHPEFKQPKTYLAQVEGDITAQALRQLQHGVVLNDGKTRPAIAQAIPEPDWLWPRTPPIRARQAIPTHWLELTITEGKNRQVRRMTAAVGLPTLRLIRVQIGDYALGDLAQGQWRHLGGI*