ggKbase home page

OR_07242016_12_scaffold_541_8

Organism: OR_07242016_12_Halothiobacillus_neapolitanus_53_168

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: 4213..8379

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 1388.0
  • Bit_score: 2553
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 1388.0
  • Bit_score: 2553
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXG5_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 1388.0
  • Bit_score: 2553
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4167
ATGAGCTATTCATTCACTGAAAAAAAGCGAATCCGCAAGGAATTCGGCCACCGCGCCGATATCCTGCCGGTACCGTATTTGCTGGCGACTCAAGTTGAGTCTTACAAAGCGTTTTTGCAACAGGGCGTTCCGGCAAAAGGCCGGGCTGACGCGGGTTTGCATGCTGCATTGAGTTCGGTTTTCCCCATTCGAAGTCACTCGGGTAGTGCCGAAATCGCCTACGTCGATTACCACTTTGGCGAGCCTGCCTTTGATGTGCGGGAATGTCAAATCCGTGGCTTGAGCTATGGTGCCCCCTTGCGGGCAAAACTCCGTTTGGTCATTTACGATCGTGAAGCGCCTGCCGGTGCCAAAGTGGTTAAAGATATCCGCGAGCAAGATGTCTACCTGGGTGAAATTCCGTTAATGACGGAAAGCGGCACGTTTGTGATTAACGGTACAGAGCGCGTCATCGTGTCGCAGCTTCATCGCTCGCCGGGTGTGTTTTTTGACCACGATAAAGGCAAAACCTCAAGCTCGAAAAAAATCCTATTTTCAGCGCGCGTGATTCCATATCGTGGTTCTTGGTTGGATTTCGAGTTTGATCAAAAAGACATTCTCTATGCGCGCATCGACCGCCGCCGAAAAATTCCTGCCTCGATTATTTTGCGCGCCTTGGGTTACACCAACAGCGATATGCTCAATATATTCTTCGAACATGATGAGTTTCGCGTGGATCCTGAGGGCGGCTTGGCTCTGACCTTGGTGGCTGATCGCCTTAAAGGCACCGATGCGGCATTTGATATTGATGTCGATGGTGAGAATTTAATCAAAACCGGTAAGCGCATTACGGCACGGCATGTGCGTGCGCTTGTGGCCGCTAATATCTCAAGTTTACCGGTGCCCATTGATTTCATCGTAAGTCGTGTTTTGGCTGAGGATGTGATTGATAAAAATACCGGTGAATTGCTGGCGCGCGGCAACGATGAATTAACGCAAGAGTTGATTCTGAAATTTGCGAAAGCAGGTATTACCGCATTCAAAACATTGTATTTCAATGACATTGATCGTGGTCCGTTCATGTCGTTAACTTTGCGCGCGGACCCATCCTCAACGCCGTTAGAGGCCATGGTCGAAATCTACAAAATGATGCGCCCGGGTGAGCCGCCAACGAAAGATTCAGCCGAGGGCTTATTCCACGGTTTGTTCTTCACCGAAGATCGTTACGATTTATCGGATGTGGGTCGGATGAAGTTTAACCGCCGGGTTGAGCGCGGTACCGATGTGGGGCCGGGTGTTTTGTACGATGGCAAATATTTTGCTCATTTGTCGGCGCAGGGCAATGAGTCAGCAAAGCAGATGTATCAAAGCCAAGGCGAGGTTTCCGACATCCTGGATGTCATGAAAACCTTGATCGATATCCGCAATGGCAATGGCAAAACCGATGACATTGATCACTTGGGCAATCGTCGGATTCGTTCCGTCGGCGAGATGACAGAAAATGTATTCCGCATTGGTTTGGTTCGTGTGGAGCGGGCGGTTAAAGAGCGTTTAACCCAAGCGGAATCAGAAGGTTTGACCCCGCAGGATTTGATTAATGCCAAACCGGTCGCGGCGGCTATTAAAGAGTTTTTCGGCTCAAGTCAGCTTTCGCAATTTATGGATCAAAATAACCCCCTATCTGAAATTACGCACAAGCGGCGTATTTCAGCCTTAGGCCCGGGTGGTTTAACGCGCGAACGCGCCGGCTTTGAAGTGCGCGATGTGCATACCACGCATTATGGCCGTGTGTGCCCAATTGAAACGCCTGAAGGTCCGAACATTGGTTTAATTAACTCGCAAGCGACCTATGCGCGCACCAATCATTACGGGTTTTTGGAAACCCCTTATCGCACCGTAAAAGACGGCGTGGTAAGCAAAGAAGTGGATTGGTTGTCTGCCTATGAAGAAGAAAAATTCACCATTGCCCAAGCCAATGCGCCCCTAGATGATAACGGCGTATTGCAAGGCAATTTGATTTCAGTGCGTCGGGCTGGCGAGTTTATGCTGGCAGGTCCTGAAGAAATCCAATATATGGATGTCTCGCCTAAACAGATCGTCTCTATCGCGGCATCAATTATTCCGTTCCTTGAACACGATGATGCGAACCGTGCGTTGATGGGTTCGAACATGCAACGCCAAGCCGTGCCAACGCTTCGCGCCGATAAGCCGCTCGTGGGTACCGGGATGGAGCGTGTGGTTGCCACCGATTCAGGCTCTTGCGTGGTTGCACGGCGTGGGGGGGTGGTTGATCGGGTGGATGCGGCGCGGGTTGTTGTGCGTGTTAATGCCGCCGAAGCCAGCCAAGGTGATGTGGGTGTCGATATCTACAACCTCACTAAATACACCCGTTCAAACCAGAATACCTGCATTAATCAAACCCCTTTGGTTAAAGCCGGGGATTTGATTGCGAAAGGCGATGTGCTGGCTGATGGTCCCTCGGTTGATATGGGTGAATTGGCCTTGGGTCAAAATATCCTGTGCGCCTTTATGCCGTGGAACGGGTATAACTTTGAAGATTCAATTCTCTTATCTGAGCGGGTCGTGCGGGAAGATCGCTTAACGACAATTCATATCGAAGAATTGAACTGCATCGCACGGGATACAAAATTAGGCTCTGAAGAAATCACAGCGGATATTCCGAACGTGGCGGAAAGCCTGCTCAATAAGCTGGATTTAGCGGGCATTGTGCATGTTGGGGCCGAAGTTCGGCCGGGTGATATTTTAGTTGGCAAGGTCACGCCGAAAGGTGAAACCCAGCTCACACCGGAAGAGAAACTCCTTCGGGCTATTTTTGGTGAAAAAGCCTCTGATGTAAAAGATACCTCACTGCGTGTGCCGCCTGGCATGGAAGGCACCGTGATCGATGTGCGGGTATTTACCCGTGATGGCATCGAGAAAGACAGCCGAGCGCGTGCGATTGAAGAGGCCGATCTTGAGGCCGTGCGCAAAGATCTTAAAGACCGCATGCGGATTATCGAAGGCGACATTACCGCGCGGGTTAAATCGGTGCTGATTGGCCAGGTTGCCGTGGGCGGCCTTGGGGTTAAAGCGGGGAGTAAAATCACCGCTGCGCAACTCGAAAAGGTTGATCCGGTTAAGTGGTTGGAAATTCGAGTGGAAGGCGAAGAGGCGGCGCAAGCGCTTGAGGAGTACAACGCGCAGTTAATCCAAGCGCAGGCAGATATTGATAAGCGCTTTGAAAATAAAAAGAAAAAAATCCAACAAGGTGATGACCTTGCGCCGGGCGTGCTCAAAATGGTCAAAGTGTTTGTGGCCGTTAAACGTCGCATTCAGCCGGGCGATAAACTCGCTGGCCGCCACGGGAACAAGGGCGTCGTGTCCATGATTGTGCCTGAAGAAGATATGCCCTACATGGACAATGGCCAGCCGGTGGATATTTGCTTAAATCCGCTGGGTGTGCCGTCGCGGATGAATATTGGGCAGATTCTTGAAACGCATTTGGGCTTTGCCGCACGCGGGCTGGGGCTGAAAATCGAAGAAATGCTCAAACTCGAACGTGCCAAAGCGCTGGTTGAATTGCGGGCATTCTTGCATAAAGTGTACAACCACAATGCGCACAAAAACGTTGATTTAGATTCGCTAACCGACGATGAGCTGATTGAGCTGGCGCGCAATCTGCGCGGCGGCGTACCGATGGCAACGCCGGTATTTGATGGCGCATCCGAGGATGAAATTAAGTACATGCTTAATTTGGCGGGCTTGCCCACCTCAGGCCAAGTGCAGCTTTTCGATGGGCGTACGGGCGAGGCCTTCGAGCGCAAAACCACCGTGGGTTATATGTACATGCTGAAATTGAACCACTTGGTTGACGATAAAATGCATGCCCGTTCAACGGGGCCCTACTCGCTTGTTACCCAGCAACCTTTGGGTGGTAAAGCGCAGTTTGGTGGTCAGCGGTTTGGGGAGATGGAAGTGTGGGCGCTTGAGGCTTATGGCGCGGCGTACACCTTGCAAGAAATGCTTACCGTTAAGTCAGATGACGTCAATGGTCGTAACAAAATGTATAAAAACATTGTCGATGGCGATCTTAAAATGGATGCCGGTATGCCGGAATCCTTTAACGTGTTGCTCAAGGAAATTCGATCGCTCGCAATCAATGTGGAACTGGAGTTGGGTAAAGAGTAA
PROTEIN sequence
Length: 1389
MSYSFTEKKRIRKEFGHRADILPVPYLLATQVESYKAFLQQGVPAKGRADAGLHAALSSVFPIRSHSGSAEIAYVDYHFGEPAFDVRECQIRGLSYGAPLRAKLRLVIYDREAPAGAKVVKDIREQDVYLGEIPLMTESGTFVINGTERVIVSQLHRSPGVFFDHDKGKTSSSKKILFSARVIPYRGSWLDFEFDQKDILYARIDRRRKIPASIILRALGYTNSDMLNIFFEHDEFRVDPEGGLALTLVADRLKGTDAAFDIDVDGENLIKTGKRITARHVRALVAANISSLPVPIDFIVSRVLAEDVIDKNTGELLARGNDELTQELILKFAKAGITAFKTLYFNDIDRGPFMSLTLRADPSSTPLEAMVEIYKMMRPGEPPTKDSAEGLFHGLFFTEDRYDLSDVGRMKFNRRVERGTDVGPGVLYDGKYFAHLSAQGNESAKQMYQSQGEVSDILDVMKTLIDIRNGNGKTDDIDHLGNRRIRSVGEMTENVFRIGLVRVERAVKERLTQAESEGLTPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSQATYARTNHYGFLETPYRTVKDGVVSKEVDWLSAYEEEKFTIAQANAPLDDNGVLQGNLISVRRAGEFMLAGPEEIQYMDVSPKQIVSIAASIIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERVVATDSGSCVVARRGGVVDRVDAARVVVRVNAAEASQGDVGVDIYNLTKYTRSNQNTCINQTPLVKAGDLIAKGDVLADGPSVDMGELALGQNILCAFMPWNGYNFEDSILLSERVVREDRLTTIHIEELNCIARDTKLGSEEITADIPNVAESLLNKLDLAGIVHVGAEVRPGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPPGMEGTVIDVRVFTRDGIEKDSRARAIEEADLEAVRKDLKDRMRIIEGDITARVKSVLIGQVAVGGLGVKAGSKITAAQLEKVDPVKWLEIRVEGEEAAQALEEYNAQLIQAQADIDKRFENKKKKIQQGDDLAPGVLKMVKVFVAVKRRIQPGDKLAGRHGNKGVVSMIVPEEDMPYMDNGQPVDICLNPLGVPSRMNIGQILETHLGFAARGLGLKIEEMLKLERAKALVELRAFLHKVYNHNAHKNVDLDSLTDDELIELARNLRGGVPMATPVFDGASEDEIKYMLNLAGLPTSGQVQLFDGRTGEAFERKTTVGYMYMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRNKMYKNIVDGDLKMDAGMPESFNVLLKEIRSLAINVELELGKE*