ggKbase home page

OR_07102018_0_5m_scaffold_32_3

Organism: OR_07102018_0_5m_Sphingobacteria_36_169

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 732..4154

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 1135.0
  • Bit_score: 1795
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 1148.0
  • Bit_score: 1701
  • Evalue 0.0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 1134.0
  • Bit_score: 2229
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3423
ATGAATTTGCAGCACTTAATGGATCAATACCTGCAATCACCCCTGGTACAAGAGTTGGTGAATAGGCAAACTTATGCCGATACACAAAAAACTTATCTCAGTAATTTACAAGGAAGTAGTGCAGAATTTATAGTAAGTACTGTTTTTATGCATCCTGATGCACAGGGCATGAATCATTTAGTTATTTTAAATGATGCAGAAGAAGCAGCTTATTTTCATAATACCATTGAAAACTTAACCAGTGCTTTAGACTTGTTTTATTTTCCTGCAAGTTTCAAGAATAGGAAAAATTTCAGGCTACTGAATAGTTCGCATGTGATGTTGAGAACGGAAGCACTCACCAAGCTATCACGTGGTGGGAATAAAAAAATTATTATAACCTATCCCGAAGCCATTTTTGAAAAAGTAATTCTGCCTGAAACAATAAGCAGTAATATTATTACTATCAAAACAAATGATACCATTAATCCAGAGAGTTTAATGGACTTGTTTGTTATGTATGGTTTTGAGCGAACAGATTTTGTATACGAGCCTGGCCAGTTTGCTTTGCGAGGAGGAATACTAGATATTTATTCTTTTGGAAATGAGAAACCTTACAGAGTAGAATTATTTGGGAATGAAGTAGACAGTATTCGAATTTTTAATCCTGAAACGCAATTAAGCGAAAGAAAATTATTGCAGGTAAATATTATTCCTAATGTAGATACACTACCAGAAACATTTGGTGCAGGTTCTGTGCAAAAAATTTCCTTATTAGAATTTGTTCCGGAAAATACCATTGTATGGTTAAGAGACTGGGATGTGATTGAAGAAAAAATTCGGGTACAAGAAGAAGATTTTGAAGGGTATTTATTGTTACAAGAACAAGGTTATTTTGCCAAACAACAGGAAGAGGAAGATCATCATATTCTTAAAGAAGTACATTGGACCGATTTTATTAAAGGCCATGAAATCAAAACTATTTTAGAAACAAAGCCGCTGATTGAATTTGGATATAAACCCCATTTTGCTCAATTTGAATTAGCATTTTTGGTAAAGCCACAGCCTGCATTTAATCGTCAGTTCGATTTACTGATTAAAGATTTGAAGGCCTTGGAAGGGGCACAATACAGCATTTATATTTTTGCTGAACAGGTAAAACAATTAGAAAGACTCAACACTATTTTTACCGATTTAAACACCGAAATTCAATTCACTCCAATTGGAACTAGTATTCATGAAGGCTTTATTGACCATCAATTAAAATTGGTTTGTTATACTGATCACCAAATTTTTCAGCGATACCATAAATACAAGGTTAAGCAAGCATATAATAAAAATAAAGCCCTCACTTTAAAAACACTAAGAGATTTACAGCCAGGTGATTATGTAACGCATATTGATCATGGTGTTGGAACATATAGTGGTTTGCAAAAGCTAGAAGTGAATGGAAAAATTCAAGAAGCAGTCAGAATTATTTATAAAGACAGCGATATTTTATATGTGAATATAAATTCACTGCACAAAATTTCTAAGTATACAGGTAAAGAAGGGACTGTTCCTAAAGTTAATAAATTAGGTAGTGATGTTTGGAATAGATTGAAAGAAAAAACAAAAGCTAAGGTAAAAGAAATCGCTTTTGATTTAATTAAGTTATACGCTCAAAGAAAGGCCCAGAAAGGGTTTGCACATGCTCCTGATAATTATATGCAAACCGAGCTGGAAGCATCATTTATTTATGAAGATACCCCTGATCAAAGTAAAGCCACTGCAGATGTAAAAAAAGACATGGAACAAGAAGCACCCATGGATCGATTGGTATGTGGAGATGTAGGATTTGGTAAAACAGAAATTGCTATTAGGGCAGCTTTTAAATCGGTAGTAGATGGAAAGCAGGCAGCAGTTTTAGTTCCTACCACTATTTTAGCTTTTCAGCATTATAAAACATTTAAAGACCGATTAAAAGATTTTCCCGTAACCGTTGATTATATTAATCGATTTAAATCTGCTAAAGAAAAAAAAGAAACCTTACAAAGGGTTAAAGAAGGAAAAGTAGACATTATTGTAGGTACCCATGGATTACTAGGAAAAGAAGTTGAGTTTAAAGATTTGGGCATCATGATTATTGATGAAGAGCAAAAATTTGGCGTAGGGCATAAAGAAAAATTAAAGACCTTAAAAACAAATGTAGACTGCCTTACATTAACCGCTACCCCCATTCCAAGAACTTTGCAGTTTAGTTTAATGGGAGCTAGAGATTTGAGCATCATCAACACACCTCCGCCGAATAGACAACCGATTCAAACAGAAGTACAAGTATTTAATCAAGACTTTATACGCGATACTATTTATTTTGAAACAGAAAGAGGAGGACAGGTATTCTTTATCCATAATAGGGTGCACGGATTGGCAGAAATGAGTGCACTTATTCAAGGTTTGTGTCCTGATTTAAGTATTGGTTTTGCCCATGGTCAATTAGAAGGACACGAATTGGAAGAGCGTATTTTCGACTTTATCGAACGCAAATACGATGTATTGGTTTGTACAAATATTGTGGAAAGTGGAGTAGATATTCCTAATGTAAATACCATTATTGTAAATAATGCCCATCAATTTGGATTAAGTGATTTGCATCAATTAAGGGGTAGGGTAGGAAGAAGTAATAAAAAAGCTTTCTGTTATTTGTTAGCACCTCCAATGAGCACTTTGCCTGTTGACTCTAGAAAAAGATTGCAAACCTTAGAACAGTTTAGTGATTTAGGGAGTGGATTTCAGATAGCCATGAGAGATTTGGATATTAGAGGGGCAGGTAATATGTTAGGTGGAGAACAAAGCGGCTTTATGGCGGAGATTGGTTTTGAAATGTACCAGAAAATATTAGAAGAAGCCATTCGAGAATTAAAGCGAACTTCTTTTAAAGATTTATTTAAAGAAGAGATTAGTAAGCAAGATGATTTTGTAAGCGACTGTACCATCGATACCGATTTAGAAATATTAATCCCGGATAGCTATGTGGAAAGTATTACAGAAAGACTATCGCTCTATACTCGTTTAGACAGTTGTGAAGACGAAGCCGAATTGCAATCTTTTCACGCAGAAATGCTGGATCGTTTTGGCCCAATGCCCGAATCGGTGGAAGATTTGTTTACTACTGTTAGATGCCGCAAATTGGCAGTAGACTTAGGTTTTGAAAAAATGACTTTAAAGGAAGACACCCTTCGTTGCTATTTTATTAATAGACCCGACTCACCCTATTTTGAATCTGAATTGTTTAAAGAAGTATTGGCTTATTTACAAACAGGAACCAATAAAGGAAGATTAAAACAAACCGGTAAAATGTTCCTAATGGTGGTAGAACCCATCAAGGGAATGGAGGAAATGCATGGCTTTTTGCAGAAAATGCATACAACCGTAATTGCCCAATATAAAAAAACCCCGAACTAG
PROTEIN sequence
Length: 1141
MNLQHLMDQYLQSPLVQELVNRQTYADTQKTYLSNLQGSSAEFIVSTVFMHPDAQGMNHLVILNDAEEAAYFHNTIENLTSALDLFYFPASFKNRKNFRLLNSSHVMLRTEALTKLSRGGNKKIIITYPEAIFEKVILPETISSNIITIKTNDTINPESLMDLFVMYGFERTDFVYEPGQFALRGGILDIYSFGNEKPYRVELFGNEVDSIRIFNPETQLSERKLLQVNIIPNVDTLPETFGAGSVQKISLLEFVPENTIVWLRDWDVIEEKIRVQEEDFEGYLLLQEQGYFAKQQEEEDHHILKEVHWTDFIKGHEIKTILETKPLIEFGYKPHFAQFELAFLVKPQPAFNRQFDLLIKDLKALEGAQYSIYIFAEQVKQLERLNTIFTDLNTEIQFTPIGTSIHEGFIDHQLKLVCYTDHQIFQRYHKYKVKQAYNKNKALTLKTLRDLQPGDYVTHIDHGVGTYSGLQKLEVNGKIQEAVRIIYKDSDILYVNINSLHKISKYTGKEGTVPKVNKLGSDVWNRLKEKTKAKVKEIAFDLIKLYAQRKAQKGFAHAPDNYMQTELEASFIYEDTPDQSKATADVKKDMEQEAPMDRLVCGDVGFGKTEIAIRAAFKSVVDGKQAAVLVPTTILAFQHYKTFKDRLKDFPVTVDYINRFKSAKEKKETLQRVKEGKVDIIVGTHGLLGKEVEFKDLGIMIIDEEQKFGVGHKEKLKTLKTNVDCLTLTATPIPRTLQFSLMGARDLSIINTPPPNRQPIQTEVQVFNQDFIRDTIYFETERGGQVFFIHNRVHGLAEMSALIQGLCPDLSIGFAHGQLEGHELEERIFDFIERKYDVLVCTNIVESGVDIPNVNTIIVNNAHQFGLSDLHQLRGRVGRSNKKAFCYLLAPPMSTLPVDSRKRLQTLEQFSDLGSGFQIAMRDLDIRGAGNMLGGEQSGFMAEIGFEMYQKILEEAIRELKRTSFKDLFKEEISKQDDFVSDCTIDTDLEILIPDSYVESITERLSLYTRLDSCEDEAELQSFHAEMLDRFGPMPESVEDLFTTVRCRKLAVDLGFEKMTLKEDTLRCYFINRPDSPYFESELFKEVLAYLQTGTNKGRLKQTGKMFLMVVEPIKGMEEMHGFLQKMHTTVIAQYKKTPN*