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OR_07102018_0_5m_scaffold_3178_6

Organism: OR_07102018_0_5m_Sphingobacteria_36_169

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3493..4365)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI00035E858E similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 290.0
  • Bit_score: 428
  • Evalue 4.20e-117
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 288.0
  • Bit_score: 428
  • Evalue 5.90e-117
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 417
  • Evalue 1.60e-114

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGGTATGCGCCAACTCAAAATAACCAAGTCGATCACCAATCGTGAATCGCAGAGTCTAGAAAAATATCTACAAGAAATTGGTAAAGTAGATTTAATTGAGCCCGAAGAGGAAGTTCAATTGGCGTTAAAAATTAAAGAAGGAGATACCAAAGCATTGGATCGTCTTGTTAAAGCAAACCTTCGATTTGTAGTGTCTGTTGCTAAACAATACCAGAATCAAGGGCTTACTTTATCTGACTTAATTAATGAAGGCAATTTAGGGTTGATTAAAGCCGCTATGCGATTTGACGAAACCAAGGGGTTCAAATTTATTTCTTATGCAGTGTGGTGGATCAGACAAAGCATTCTTCAATCTTTGGCCGAACAAAGCCGTATTGTTCGATTGCCATTAAATAAAGTTGGACTTACCAATCGCATCAGTAAAGCCTATCAGTTTTTAGAACAGGAATACGAAAGAGAACCCACCCCTCAAGAGTTGGCCGATTTTTTAGAATTGCCATTAGATGAAGTAACTGCAACCATGAAAGCAGGCTTTAAACATGTAAGTATGGATTCTCCTATCAGCAGTGGGGAAGATATTACCCTGATTGATTTATTAGAAAATACCAACGAACCAAAAACGGATGATAAGTTGGTTTACCATGAATCATTGCATGTTGAAATTGAAAGAAGTTTGGGAACATTAACAGACCGTCAAAAGAAAGTACTTTGTTTTTTCTTCGGAATAGGAGTAGACAGAGCGCTGAGCTTAGAAGATATTGGGTCACGATTTAATCTTACCCGCGAAAGAGTTAGACAAATAAAAGACAAAGCCATTAATAAATTACGATCAGCCAACAGGGCTAGACAATTGCGATATTATTTGGGTTGA
PROTEIN sequence
Length: 291
MGMRQLKITKSITNRESQSLEKYLQEIGKVDLIEPEEEVQLALKIKEGDTKALDRLVKANLRFVVSVAKQYQNQGLTLSDLINEGNLGLIKAAMRFDETKGFKFISYAVWWIRQSILQSLAEQSRIVRLPLNKVGLTNRISKAYQFLEQEYEREPTPQELADFLELPLDEVTATMKAGFKHVSMDSPISSGEDITLIDLLENTNEPKTDDKLVYHESLHVEIERSLGTLTDRQKKVLCFFFGIGVDRALSLEDIGSRFNLTRERVRQIKDKAINKLRSANRARQLRYYLG*