ggKbase home page

OR_07102018_0_5m_scaffold_825_5

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(3878..4408)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 168.0
  • Bit_score: 247
  • Evalue 1.70e-63
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 168.0
  • Bit_score: 247
  • Evalue 8.60e-63
Peptide deformylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVS3_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 168.0
  • Bit_score: 247
  • Evalue 6.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCGTTACTTGAGATTGTGCTTTTCCCCGACGAGCGGTTACGGCGTGTGGCCACCGATGTAACCCAATTTGACGACCATCTGGCGCGCGTGGCCGAGCAGATGATGGCAACGATGTATGCCTCGCGCGGCGTGGGTTTGGCCGCAACTCAGGTGGATGTGCATCAGCGTTTTTTTGTGGCCGATTGCGCGGACGAGGGTGCGCCTGCCGCCCCTATGGTATTGATTAACCCGATTATTATTGATCGAGAAGGCTTAATTGAATCGGAAGAAGGTTGCCTGTCGATCCCAGATATTAATGACAAAGTGATGCGCAGTGAATCGGTCACCGTTCGGGCGCAATCGGTGCAAGGCGCCTCATTTGAGCTAACAACGGGTGGGTTATTGGCCGTGTGTATTCAGCACGAAATTGATCATTTAAATGGCAAGCTTTTTATTGATTATTTATCGCCCCTCAAGCAACAGCGCATTCGCAAAAAGCTAGAGAAAGCCCACCGTCAAAAAGCACTCGATGCCAAGGACTTTTTATGA
PROTEIN sequence
Length: 177
MSLLEIVLFPDERLRRVATDVTQFDDHLARVAEQMMATMYASRGVGLAATQVDVHQRFFVADCADEGAPAAPMVLINPIIIDREGLIESEEGCLSIPDINDKVMRSESVTVRAQSVQGASFELTTGGLLAVCIQHEIDHLNGKLFIDYLSPLKQQRIRKKLEKAHRQKALDAKDFL*