ggKbase home page

OR_07102018_0_5m_scaffold_584_4

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: 2864..3472

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZY2_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 202.0
  • Bit_score: 299
  • Evalue 1.60e-78
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 202.0
  • Bit_score: 299
  • Evalue 4.40e-79
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 202.0
  • Bit_score: 299
  • Evalue 2.20e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCTAAAGAAACGTTTGTACTTAATGCCAAGCGTCGTGATGATCAGGGGAAAGGTGCGAGCCGCCGCCTGCGTCACGAAGGCCGCATTCCGGCGATTGTTTATGGTGGTAGCACAGCCCCCGAGGCCATTACCATTGAACACAATGAAATCATCAAGCACCTTGAGCACGAAGCGTTTTACTCGCATGTGCTTGAATTAAATGTTGATGGCACCCCCACCCAAGTTATTTTGCGTGATTTGCACCGCCACCCGTTCAAGCCTGCGGTAATGCATGCCGATTTTCAGCGCGTTTCAGCCAACGAAACCTTGCATGTCACCGTGCCTTTGCATTTCTTGAACAAAGATACCTGCGTCGGCGCGAAAGCCGGTGGCTTGGTGCATATTGCCTTAACTGAAATTCATATCGACTGCACGGCAAGCGCCTTGCCTGAGTTTATTTCGGTTGATCTTATGGCCCTGGATATGCATCAATCCTTGCATTTAAGCCAAATCGTGCTGCCTGCTGGCGTTAAAATCCCAGCGTTAGCCCAAGGTGCGGAGCACGATGCAGCGGTGGTCACCATTCACGCATCCAAACTGGACAAAACCATCGAACCTGAAGCCTAA
PROTEIN sequence
Length: 203
MSKETFVLNAKRRDDQGKGASRRLRHEGRIPAIVYGGSTAPEAITIEHNEIIKHLEHEAFYSHVLELNVDGTPTQVILRDLHRHPFKPAVMHADFQRVSANETLHVTVPLHFLNKDTCVGAKAGGLVHIALTEIHIDCTASALPEFISVDLMALDMHQSLHLSQIVLPAGVKIPALAQGAEHDAAVVTIHASKLDKTIEPEA*