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OR_07102018_0_5m_scaffold_468_4

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(1931..2578)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXD8_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 191.0
  • Bit_score: 255
  • Evalue 4.70e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 191.0
  • Bit_score: 255
  • Evalue 1.30e-65
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACX95152.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 191.0
  • Bit_score: 255
  • Evalue 6.60e-65

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCCTATTCAGCCGCCCGAGCCCCCACCTAGGGCTCAACCCATGCCCCAATCTAAGGCCGATGCGGATGGCCGCTTGCCCGACTGGCTTGCCGCCTGTGCTGCGGGCGATCGCGCCGCGTTTAATCAGCTCTATCAAGCTACCTCAGGGCGATTATACGGCTTGTGTCTGCGGATTTTGCGAGAAGAAGGCCGCGCGCAAGAATGCCTGCAAGATGTATTTTTGGCCGTATGGCAGCAAGCCGGCCGATTTGATCCCGCGCGCGCCTCGGCCATGACGTGGCTTGCCGCCATTACTCATCACCGTGCCATTAGCCTGTCGCGGCGTTTTACCCGCGAACTCACCGCCGATGACTGGACGGAGTTTTTGGCCCATGCCGAGCGCCCCGATCGTGTCGATTTACCCGATACCGACCAGCATGCCCCCGATCACGATTGGCATTTGCTGGATCGAACGCGGTTACAAGAATGCCTCGATGCCTTGCGGGCGGAACCACGCACGGCGGTGCAGTATGCTTTTTGGCAGGGCGATACCTATCAAGAAATTGCCGATAAGTTGGCCACCTCACTCAACACGGTTAAAAGCTGGGTGCGCCGGGCGCTGGCGGAATTAAAAACCTGTATTGGTCGAGGGGTGATGCCCTCATGA
PROTEIN sequence
Length: 216
MPIQPPEPPPRAQPMPQSKADADGRLPDWLAACAAGDRAAFNQLYQATSGRLYGLCLRILREEGRAQECLQDVFLAVWQQAGRFDPARASAMTWLAAITHHRAISLSRRFTRELTADDWTEFLAHAERPDRVDLPDTDQHAPDHDWHLLDRTRLQECLDALRAEPRTAVQYAFWQGDTYQEIADKLATSLNTVKSWVRRALAELKTCIGRGVMPS*