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OR_07102018_0_5m_scaffold_2904_4

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: 2571..3290

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYP3_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 239.0
  • Bit_score: 386
  • Evalue 1.50e-104
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 239.0
  • Bit_score: 386
  • Evalue 4.30e-105
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 239.0
  • Bit_score: 386
  • Evalue 2.10e-104

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAATGTGCGTGCCATGTATAGCCATGTGCAAAGTGGGGGCAATGCGGCGGTGGTGGCCGAGCATGCCAGCTTGGTCAAGCGGATTGCCTTCCACTTAATGAATCGCTTGCCAGATCATGTTCAAGTGGATGATCTTATTCAGTCCGGCATGATGGGGCTGCTGGATGCGGCAAGGCTTTTTGATGCCAGCCATGGCGCCTCATTTGAAACCTACGCGGGTATTCGGATTCGCGGTGCCATGCTCGATGAACTGCGCCGAAACGACTGGACCCCGCGCTCTGTACATCGACGCCACCGTGAAATTGCCCAAGCGGTGCGAGAAATTGAAGCCCAAACCGGTGCCGAGGCCAAAGACAGCGATGTGTGCGCCAAACTCGGCATTAGCTTGGATGAATACTTTGATGCCATCCATGATTTTGCCCAAGTGCGCTTAACGCCGCTCGATCATAGTGGTGATGATCATGATGAAACGCTTGATATTGCCGATCACGGCAATCAACCCGATCAACACCTAAGCCAAGAGCGGTTTTCAGCTGATTTGGCCGAGCACATAGCCGCCCTGCCTGAGCGCGAGCGGCTGGTAATGTCGTTGTATTACGTGGATGAATTAAATCAAAAAGAAATTGGTGCCGTGCTGGGTGTGTCAGAATCTCGCGTGTGCCAAATTCAGAGCAAAGCCATTTTGCGGCTTAAATCCGCTATGCAAGATTGGCGTTAA
PROTEIN sequence
Length: 240
MNVRAMYSHVQSGGNAAVVAEHASLVKRIAFHLMNRLPDHVQVDDLIQSGMMGLLDAARLFDASHGASFETYAGIRIRGAMLDELRRNDWTPRSVHRRHREIAQAVREIEAQTGAEAKDSDVCAKLGISLDEYFDAIHDFAQVRLTPLDHSGDDHDETLDIADHGNQPDQHLSQERFSADLAEHIAALPERERLVMSLYYVDELNQKEIGAVLGVSESRVCQIQSKAILRLKSAMQDWR*