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OR_07102018_0_5m_scaffold_6030_2

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(330..1517)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXA0_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 353.0
  • Bit_score: 419
  • Evalue 2.60e-114
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 353.0
  • Bit_score: 419
  • Evalue 7.50e-115
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ACX95114.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 353.0
  • Bit_score: 419
  • Evalue 3.70e-114

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCACCACCGTTTAGCCGCACTCATCGGGGCAATTTTTTGGCCGCTTTGTCTCGCTGCGCCGCTGGCCTTTGCCGACACCGCGCTCCCCGCGCTTGAAGTCAACTCAACCGCCAGCGATGCCAACCCGCCCATTGCCGCCAGCCAACCGCCGCCCCTAGATGAAACGCAAGCACTCTCGTTTTATGGCCACTGGGATTCGGATGCGGTGAATTATTTTTCCGGCGGCTTAAACACCGGATTCATATACAACAGCGTCGCGGTGGGCGGCGTCACCTTCAAGGGCGATGCGCTTGGCCTGCCGCGCAGCATTTTTAATTTTTCCGTGATGGGCACGCGCACGGGCTTAGGCGCTGAAAAATTACTGGGCGATTCCCTTATCAACCCCAGCAATATCGAAGGTGATCGCAACCGGATCGTGCTCAATACCGCATTTTGGCAACAAAACTGGCTCAGCCAACCCGGGCTGAATATCGCCACCCGCACCGGGGTATTTGATTTAAGCGCCGATTTCATTAACACCGGCAACGCGGGCCAATTACTCAATAGCTCGTTTGGGCTTGATCCCGCCATGACCGGCAATTTTACCGCCTCGACCTTTCCGCAAAATGGCAGCGGGGTTGTCGCCACGCTCGATAATCGGCAATTAAGCACCGATACCCCGCCCTTAACGCTCAACCTTGGCCTCATTCAAGGCGATGTAAACCGCCAAACGCAGCCCTTCAACCAAGGCGTGCTCAATATCGCCGAAGGCCAATGGCAACCCGAGGCGGGCAGCGCCTACAAAATCGGGGTTTGGCAAAAACGCGGTGATGATCTGGCCACCGTTCGGGGCAGCTATTTAAGTGCCGAGCACAATTTATATAGCCAAGGCGCGCAATCACTGGATGGTTTTCTGCGCGCCAGCCTCGCCAGCGGCGCTCGGGGCAGCCTGCAAGTTAGCCGCTATTTAAGCGCAGGCTTTAACTGGCAAGCCCCCTTTACGGCGCGCCCAGATGATTACCTAACCGTGGGTTTTGGCGGCGTTCGCCTGCAACCCACCGGCCAGATTGAACGGCTTTTTGAGGCCGCCTACATTATTAAACTCAGCCCGCGCATCTATCTGCAACCCGATATTCAGTACATCCAGCACCCCAATGGCAACCTGCCCAACGCCTGGGTCGGCATTGTGCGACTGCATATCGAATAG
PROTEIN sequence
Length: 396
MHHRLAALIGAIFWPLCLAAPLAFADTALPALEVNSTASDANPPIAASQPPPLDETQALSFYGHWDSDAVNYFSGGLNTGFIYNSVAVGGVTFKGDALGLPRSIFNFSVMGTRTGLGAEKLLGDSLINPSNIEGDRNRIVLNTAFWQQNWLSQPGLNIATRTGVFDLSADFINTGNAGQLLNSSFGLDPAMTGNFTASTFPQNGSGVVATLDNRQLSTDTPPLTLNLGLIQGDVNRQTQPFNQGVLNIAEGQWQPEAGSAYKIGVWQKRGDDLATVRGSYLSAEHNLYSQGAQSLDGFLRASLASGARGSLQVSRYLSAGFNWQAPFTARPDDYLTVGFGGVRLQPTGQIERLFEAAYIIKLSPRIYLQPDIQYIQHPNGNLPNAWVGIVRLHIE*