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OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

In projects: OR_07102018_0_5m  |  GC_Halothiobacillus  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Halothiobacillus neapolitanus  →  Halothiobacillus  →  Chromatiales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 290 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_9218
Species: Halothiobacillus neapolitanus (100%)
2 1493 bp 59.01 61.99 97.45
OR_07102018_0_5m_scaffold_8731
Species: Halothiobacillus neapolitanus (80%)
5 3616 bp 51.22 61.93 84.29
OR_07102018_0_5m_scaffold_2717
Species: Halothiobacillus neapolitanus (100%)
4 3486 bp 55.13 61.88 96.56
OR_07102018_0_5m_scaffold_1117
Species: Halothiobacillus neapolitanus (100%)
10 10287 bp 49.30 61.81 89.50
OR_07102018_0_5m_scaffold_17043
Species: Halothiobacillus neapolitanus (100%)
1 1022 bp 61.45 61.79 90.70
OR_07102018_0_5m_scaffold_4535
Species: Halothiobacillus neapolitanus (100%)
3 2375 bp 54.27 61.58 100.93
OR_07102018_0_5m_scaffold_9718
Species: Halothiobacillus neapolitanus (100%)
3 2193 bp 54.95 61.56 99.32
OR_07102018_0_5m_scaffold_3734
Species: Halothiobacillus neapolitanus (100%)
2 3166 bp 53.76 61.54 91.63
OR_07102018_0_5m_scaffold_3259
Species: Halothiobacillus neapolitanus (66.67%)
3 3052 bp 55.54 61.48 85.81
OR_07102018_0_5m_scaffold_2874
Species: Halothiobacillus neapolitanus (100%)
2 3741 bp 55.57 61.43 98.16
OR_07102018_0_5m_scaffold_1099
Species: Halothiobacillus neapolitanus (80%)
15 10925 bp 53.68 61.33 93.89
OR_07102018_0_5m_scaffold_5397
Species: Halothiobacillus neapolitanus (100%)
3 2103 bp 54.07 61.13 100.00
OR_07102018_0_5m_scaffold_14352
Species: Halothiobacillus neapolitanus (100%)
1 1139 bp 50.66 61.11 81.65
OR_07102018_0_5m_scaffold_6133
Species: Halothiobacillus neapolitanus (100%)
2 1936 bp 53.00 61.05 93.91
OR_07102018_0_5m_scaffold_5134
Species: Halothiobacillus neapolitanus (100%)
3 2179 bp 54.89 60.72 93.07
OR_07102018_0_5m_scaffold_2563
Species: Halothiobacillus neapolitanus (60%)
5 5458 bp 49.56 60.57 82.14
OR_07102018_0_5m_scaffold_2587
Species: Halothiobacillus neapolitanus (60%)
5 6780 bp 53.41 60.29 73.01
OR_07102018_0_5m_scaffold_13673
Species: Halothiobacillus neapolitanus (100%)
2 1173 bp 54.39 60.23 86.96
OR_07102018_0_5m_scaffold_3482
Species: Halothiobacillus neapolitanus (80%)
5 3956 bp 54.80 60.17 93.20
OR_07102018_0_5m_scaffold_5282
Species: Halothiobacillus neapolitanus (100%)
3 2732 bp 52.01 60.12 89.06
OR_07102018_0_5m_scaffold_2882
Species: Halothiobacillus neapolitanus (50%)
6 5151 bp 53.66 60.08 87.07
OR_07102018_0_5m_scaffold_1482
Species: Halothiobacillus neapolitanus (71.43%)
7 6568 bp 53.24 59.97 84.18
OR_07102018_0_5m_scaffold_1744
Species: Halothiobacillus neapolitanus (100%)
3 5007 bp 52.13 59.95 94.13
OR_07102018_0_5m_scaffold_1467
Species: Halothiobacillus neapolitanus (100%)
10 9021 bp 51.77 59.86 87.93
OR_07102018_0_5m_scaffold_2228
Species: Halothiobacillus neapolitanus (100%)
5 4106 bp 52.00 59.66 91.70
OR_07102018_0_5m_scaffold_6479
Species: Halothiobacillus neapolitanus (100%)
2 1869 bp 54.25 59.63 97.75
OR_07102018_0_5m_scaffold_9892
Species: Halothiobacillus neapolitanus (100%)
2 1430 bp 59.23 59.48 100.07
OR_07102018_0_5m_scaffold_9473
Species: Halothiobacillus neapolitanus (100%)
2 1469 bp 59.84 59.33 99.66
OR_07102018_0_5m_scaffold_3974
Species: Halothiobacillus neapolitanus (100%)
3 2613 bp 52.28 59.01 88.06
OR_07102018_0_5m_scaffold_12833
Species: Halothiobacillus neapolitanus (50%)
2 1220 bp 48.77 58.89 68.11
OR_07102018_0_5m_scaffold_12787
Species: Halothiobacillus neapolitanus (75%)
4 1786 bp 54.87 58.79 100.28
OR_07102018_0_5m_scaffold_1781
Species: Halothiobacillus neapolitanus (60%)
5 4946 bp 54.39 58.77 90.32
OR_07102018_0_5m_scaffold_3104
Species: Halothiobacillus neapolitanus (100%)
3 3155 bp 52.74 58.76 100.70
OR_07102018_0_5m_scaffold_2555
Species: Halothiobacillus neapolitanus (66.67%)
3 3671 bp 54.10 58.76 90.47
OR_07102018_0_5m_scaffold_595
Species: Halothiobacillus neapolitanus (55.56%)
27 29811 bp 53.70 58.71 89.53
OR_07102018_0_5m_scaffold_15247
Species: Halothiobacillus neapolitanus (100%)
2 1957 bp 58.25 58.33 78.79
OR_07102018_0_5m_scaffold_8129
Species: Halothiobacillus neapolitanus (100%)
3 1620 bp 50.74 58.24 84.44
OR_07102018_0_5m_scaffold_14848
Species: Halothiobacillus neapolitanus (100%)
2 1115 bp 56.68 58.12 90.67
OR_07102018_0_5m_scaffold_15692
Species: Halothiobacillus neapolitanus (50%)
2 1077 bp 50.60 58.08 100.28
OR_07102018_0_5m_scaffold_11678
Species: Halothiobacillus neapolitanus (100%)
1 1291 bp 55.54 57.98 99.92
OR_07102018_0_5m_scaffold_6681
Species: Halothiobacillus neapolitanus (66.67%)
3 1837 bp 55.31 57.73 86.23
OR_07102018_0_5m_scaffold_17170
Species: Halothiobacillus neapolitanus (100%)
1 1017 bp 53.20 57.67 71.09
OR_07102018_0_5m_scaffold_3550
Species: Halothiobacillus neapolitanus (75%)
4 2858 bp 53.43 57.63 97.31
OR_07102018_0_5m_scaffold_5357
Species: Halothiobacillus neapolitanus (100%)
2 2112 bp 57.86 57.46 99.29
OR_07102018_0_5m_scaffold_10276
Species: Halothiobacillus neapolitanus (100%)
1 1398 bp 54.36 57.08 76.18
OR_07102018_0_5m_scaffold_3417
Species: Halothiobacillus neapolitanus (100%)
5 2942 bp 52.55 57.00 85.55
OR_07102018_0_5m_scaffold_1289
Species: Halothiobacillus neapolitanus (75%)
16 13042 bp 52.28 56.90 76.00
OR_07102018_0_5m_scaffold_10524
Species: Halothiobacillus neapolitanus (100%)
4 1979 bp 51.29 56.85 91.86
OR_07102018_0_5m_scaffold_19414
Species: Halothiobacillus neapolitanus (100%)
2 1596 bp 51.57 56.77 85.34
OR_07102018_0_5m_scaffold_6477
Species: Halothiobacillus neapolitanus (100%)
3 1869 bp 52.59 56.66 98.72
Displaying items 151-200 of 290 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.