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OR_09272017_19_scaffold_71_3

Organism: OR_09272017_19_Halothiobacillus_neapolitanus_54_831

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(2485..5955)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 1160.0
  • Bit_score: 1899
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVH0_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 1160.0
  • Bit_score: 1899
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 1160.0
  • Bit_score: 1899
  • Evalue 0.0

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3471
ATGGCGCATTCCAAACACCCCCTCCTTACGATTCCTCAAACGCCACTTGCGCCGACTTTTTTGCGCAGTGCCCGCTTGCTTGGCGTCGCACAGACGTTAGCCGACCTTGCACAGCGCACCCCGCAGGCTATTTTAGCCATCGCGCCCGATAGCCGCAGCGCCACCGACATGGCTGAAGCCTTGGCTTTATTTGGCTGCCAAGCGGAAATTTTTCCCGATTGGGAAGTGCTGCCCTATGATCGGTTCTCACCGCATCAAGAGTTAATATCCGATCGCCTCGCCAGGCTTTGGTACCTGCCCCGCACCGAGGGCGGCGTTACGCTCATTGCCGCGCCCACGTTATTGCAACGCCTATCGCCCCCGGCCTTTGTAACCGGCAACAGCTTTTTGCTGCACGCGGGCGATAAACTTAACCGCGATGCCTACCGCCAGCAGCTCACCGATGCCGGGTATCTTGCGGTTACCCAAGTGGTGCAGCCGGGCGAGTTTGCCGTGCGCGGTGGCTTAATTGATGTGTTTGCGATGGGCATGAGCCAGCCGGTGCGCATTGATTTGTTCGATGATGAAATTGAAACCCTGCGATTATTTGATCCCGAAACCCAGCGCTCGGCCGAGCCGGTTGATCGCATCACCTTGCTTCCGGCGCGTGAATATCCTTTAAACGAGGAAGGCATTGCCCTATTTCGGCGCAACTGGCGTAACCGGTTTGAGGGCGACCCCACCCGCAGCCCCGTGTATAAACAAATTAGTGAGGGCTTAATCCCCGCAGGCATTGAAACCTATTTGCCGCTGTTTTTTGAGCGCACCGCCACCCTATTCGACTACCTACCCAAAAACGCCTTACTGTTCACTTTACCCGGCATTGAGGCATCGCTCGACCGGTTCACCCATGACACCATCCATCGCTTCACCCAGCGGGCGGGCGATGTAAGCCACCCGTTGTTACGCCCCGATGAGCTCTATCAAACCGTGGATGAATACCAAGCGCAGCTCAAGCACTGGCCGCGTTTTATCACCCTGAACGCCGACCACCCAGGCCTACCCCAAGCCCTTGTTTTACCGAACAAACCCCTACCAAACCTCAGCAGCCCCAACTTTACCATCAGCCAAAGTGGCGATGCGGAACTGGCCGGTTTAATCGCCTTTGCCAGCGATTTTGCGGGGCGCATTCTCGTCACGGCAGAAAGCCCCGGTCGTCGGGAAGCCTTGGCCGACCAATTAGCCAAGGCGCGCTTGACCGCCCCCGTGTTTGAACGCTTTGAGCAATGGCTTGAAAGCGATGCGCGCTTGGGCTTGCTCGTGTCATCCATCGAGCAGGGGGCGATTTTGCATCTCCCCGATCAAAACGCCCCGCTCGCCCTCATCACCGAAACCGATTTATTTGCCGAACGCGTGGCCCAGCGGCGCAAATCCAGCACCCGCACCCGCGATGCCGATGCGTTAATCAGCAACTTAAATGAGCTGGCCATCGGTGCGCCCGTGGTGCACGAAACCCATGGGGTAGGCCGATTTGGCGGCTTAATGACGCTTGAGATGAACAATCTTGAGCAAGAATTTTTAATATTGCACTACGCCGGCGATGACAAACTCTATGTCCCCGTATCCGCGCTTGAGCTGATTTCGCGCTACACCGGCGGCAGTGAAGAAAGCGCGCCCCTGCACAAATTGGGCAGTGGTCAATGGGAAAAAGCCCGCCGCCGCGCCGCCGAGCAAGTGCGCGATGTCGCCGCCGAATTACTGGATATTCACGCCCGTCGCGCCGCAAAAAAAGGCCAAGCGCTACCCATTCCCGCCGAGGATTATGCCCGGTTCGCCCACAATTTCGCCTTTGAAACCACCCCCGATCAGCAACTCGCCATCGATAGCGTGTTAGCCGACATGGCGCGCGCCCAGCCGATGGATCGCGTGGTCTGTGGCGATGTGGGCTTTGGCAAAACCGAAGTCGCCATGCGCGCCGCGTTTGTAGCGGTGATGAATGGCAAACAAGTGGCGGTGTTGGTGCCCACCACCTTGCTTGCCGAACAGCATTTGCGCAATTTTCGGGACCGCTTTGCCGGTTGGCCGGTGCGCATTGAAGGCTTATCGCGCATGAGCAATGCCAAAAAAACCACCGAAGTGCTGGTAGACATTGCCAGTGGTCAAGTCGATATCGTAATCGGCACCCACAAATTACTCAGCGATGGGCTGGATTTCAAAGATTTGGGGCTCGTCATCATCGATGAAGAACAACGCTTTGGCGTGCGCCACAAAGAGCAGCTCAAACGCTTGCGTGCTGAAGTGGATTTACTCACCTTAACGGCCACCCCAATTCCGCGCACACTCAATATGGCGCTTTCGGGCATTCGCGATTTATCGATTATCGCCACCCCCCCGCGTGAGCGCTTATCGGTTAAAACCCTGCTGTTGCGCTGGGATGAGGCGCAAATCCGCGAAGCCGTGCAGCGAGAACTCAAACGCGGCGGGCAGGTTTATTTTCTCTATAACGAAGTCAAAACCATTGAGCGCATGGCCAAACAGCTGGCCGAATTAATTCCCGAAGCGCGCATTGCCATTGCCCACGGCCAGCTATCCGAGCGCGGGCTTGAGCAAGTCATGGCCGATTTTTATCATCAGCGCTTTAACCTGTTGCTTTCCACCACCATTATTGAATCGGGCATTGATATTCCCACCGCCAACACCATCATCATTCATCGCGCCGATAAGTTTGGCTTAGCGCAATTGCACCAGCTGCGCGGGCGGGTGGGGCGCTCGCACCATCGCGCCTATGCCTATCTCATTACGCCAGAGCCCGCACAAATGACCCCCGATGCGGTTAAACGCCTCGATGCCTTAGCCGCCCTTGAAGAGCTTGGGGTGGGCTTTACCCTCGCCACCCACGATTTAGAAATTCGCGGCGCGGGGGAATTACTGGGCGATGGACAATCGGGGCAAATGGTTGAAGTGGGCTACACCCTCTACATGGATTTACTCGATCGCGCGGTTAAAGCCTTAAAATCGGGCAAACAACCCGATTTAGCAGGCCCCCTAGAGCGCCAAACCAGCGAGGTGGATTTAGGCCTGCCCGCCCTCATTCCGGCCGATTTTGTAGACGATGTGCATACGCGTTTAATTCTCTACAAACGGCTGGCTAATTGCGCTGATCAAACCGCGATTGATCGAATGAAAGTCGAGCTCATCGACCGCTTTGGCTTGCTGCCCGAGGCCACCCAAACCTTAATTGAAACGCATCGTTTGCGCTTGCGCGCCCGCGCGGTGGGCATCCGAAAAATTGAATGCGCGGCGGGTGGCGGGCGGTTTATCTTCGCCGAACACGCGGCGATTGATCCGGTAAAACTCGTAAAACTCATACAAACCGAGCCCAGCAAATACCGCCTAACCGCCGATACGCTTAAAATCACCCAACCGCTCGATAATCTCGCCGCCCGCAGCGGCATGGTGATTCAACTCCTTAACGCGTTATCTGCCGCATGA
PROTEIN sequence
Length: 1157
MAHSKHPLLTIPQTPLAPTFLRSARLLGVAQTLADLAQRTPQAILAIAPDSRSATDMAEALALFGCQAEIFPDWEVLPYDRFSPHQELISDRLARLWYLPRTEGGVTLIAAPTLLQRLSPPAFVTGNSFLLHAGDKLNRDAYRQQLTDAGYLAVTQVVQPGEFAVRGGLIDVFAMGMSQPVRIDLFDDEIETLRLFDPETQRSAEPVDRITLLPAREYPLNEEGIALFRRNWRNRFEGDPTRSPVYKQISEGLIPAGIETYLPLFFERTATLFDYLPKNALLFTLPGIEASLDRFTHDTIHRFTQRAGDVSHPLLRPDELYQTVDEYQAQLKHWPRFITLNADHPGLPQALVLPNKPLPNLSSPNFTISQSGDAELAGLIAFASDFAGRILVTAESPGRREALADQLAKARLTAPVFERFEQWLESDARLGLLVSSIEQGAILHLPDQNAPLALITETDLFAERVAQRRKSSTRTRDADALISNLNELAIGAPVVHETHGVGRFGGLMTLEMNNLEQEFLILHYAGDDKLYVPVSALELISRYTGGSEESAPLHKLGSGQWEKARRRAAEQVRDVAAELLDIHARRAAKKGQALPIPAEDYARFAHNFAFETTPDQQLAIDSVLADMARAQPMDRVVCGDVGFGKTEVAMRAAFVAVMNGKQVAVLVPTTLLAEQHLRNFRDRFAGWPVRIEGLSRMSNAKKTTEVLVDIASGQVDIVIGTHKLLSDGLDFKDLGLVIIDEEQRFGVRHKEQLKRLRAEVDLLTLTATPIPRTLNMALSGIRDLSIIATPPRERLSVKTLLLRWDEAQIREAVQRELKRGGQVYFLYNEVKTIERMAKQLAELIPEARIAIAHGQLSERGLEQVMADFYHQRFNLLLSTTIIESGIDIPTANTIIIHRADKFGLAQLHQLRGRVGRSHHRAYAYLITPEPAQMTPDAVKRLDALAALEELGVGFTLATHDLEIRGAGELLGDGQSGQMVEVGYTLYMDLLDRAVKALKSGKQPDLAGPLERQTSEVDLGLPALIPADFVDDVHTRLILYKRLANCADQTAIDRMKVELIDRFGLLPEATQTLIETHRLRLRARAVGIRKIECAAGGGRFIFAEHAAIDPVKLVKLIQTEPSKYRLTADTLKITQPLDNLAARSGMVIQLLNALSAA*