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OR_09272017_19_scaffold_71_38

Organism: OR_09272017_19_Halothiobacillus_neapolitanus_54_831

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 39310..40350

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L243_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 325.0
  • Bit_score: 508
  • Evalue 2.90e-141
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 325.0
  • Bit_score: 508
  • Evalue 8.20e-142
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 325.0
  • Bit_score: 508
  • Evalue 4.10e-141

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGATGGCCAGATTAACGCCTGCTCCAGAACCGCTCGAAAACTTGCATGATTTATCTTTAGTGCAAGACGTAAGCGCGCGCCACGCCCTTGATGCCGATGACGAGCCTGATGAGGCTTTGGATTTATCTGAGGTTGCCGATGACCCTGAGCTCGCCGCTGAAGATACGCCCGATTTTGCGAAAACTTTTACCGCCTCGGATTCAGAATCAGTCGATCCTGTGCGCTTGTACCTGCGCGATGTGGAAACCGAGCGCCTACTCACCGCCGAAGAAGAAGTTAGTTATTCCCGGCGGGCGCAAGCGGGTGATGAATCGGCGCGGCAAAAAATGATTGTGTGTAATTTGCGCTTGGTCATTAAAATTGCCCGCCGCTATATGAATCGTGGTCTTGATTTGCTCGATTTAATTGAAGAGGGCAATTTAGGCTTGATGCGCGCGGTCGAAAAATTTGATCCCGAGCGCGGGTTTAGATTTTCAACCTATGCCACGTGGTGGATTCGCCAAACCATTGAGCGCGGTTTAATGAACCAATCGCGCACGGTGCGTTTGCCGGTGCATGTAGTTAAAGAAGTGCACAGTTTTAATCGTGCCGCGCGTAAAATTGCGCAAAATCAAAATGCTGAGGTCACAGCCGAGCAAATTGCCGATCACCTTGATCGCCCCGTGGATGACGTGCTGAAAGTGATGGCCTATAACGAGCGTCAATCCTCGTTCGATAGCCCGCTCAAAGGGGATGGTGAGTTCTCGTTATTGGATTTAATCCCCGATGAGGCTTGCAATCAGCCCGATGAGATTTTGCAAGATAACGGGGTTAATACTTTGTTAAATAAGCTTTTATCTCAGCTCGAATCCAAGCAGCGTGAAGTGCTGATGCGGCGCTACGGCTTGCGCGGCTATGAGACGCAAACCCTCGAAGAAGTGGGGGCATTGCTCGGGGTAACGCGCGAGCGTGTGCGGCAAATTCAGCTTGAAGCCGTGCGCAAGCTCAAGCAATTGGCCAAAAATGCTGGGGTGACTGCCGATACCATTTTCGCGCAGTAA
PROTEIN sequence
Length: 347
MMARLTPAPEPLENLHDLSLVQDVSARHALDADDEPDEALDLSEVADDPELAAEDTPDFAKTFTASDSESVDPVRLYLRDVETERLLTAEEEVSYSRRAQAGDESARQKMIVCNLRLVIKIARRYMNRGLDLLDLIEEGNLGLMRAVEKFDPERGFRFSTYATWWIRQTIERGLMNQSRTVRLPVHVVKEVHSFNRAARKIAQNQNAEVTAEQIADHLDRPVDDVLKVMAYNERQSSFDSPLKGDGEFSLLDLIPDEACNQPDEILQDNGVNTLLNKLLSQLESKQREVLMRRYGLRGYETQTLEEVGALLGVTRERVRQIQLEAVRKLKQLAKNAGVTADTIFAQ*