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OR_07102018_0_5m_scaffold_1574_7

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: 4307..4912

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Thiomonas RepID=D5X4S1_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 361
  • Evalue 3.30e-97
rpoE; RNA polymerase sigma-E factor (Sigma-24) similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 361
  • Evalue 9.40e-98
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 361
  • Evalue 4.70e-97

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Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGAGCAAGACACACAAAGCGATGCCGTCCTGGTGCAGCAGGTTCAGGCGGGGCATCAGAAGTCATTCGACCTGCTCGTCGCCAAGTATCAGCGGCGGATCTACCGGCTGGTGCTGCGCTTCATCCGCGATCCGGCTTTGGCCGAAGATGTGGCGCAGGAAACATTCTTGCGCGACTACCGTGACATTGGTCAATTTCGCGGCGATAGTCAGTTTTATACCTGGCTCTATCGCATCGCCGTCAATACCGCAAAAAAAGCCATATCCGACGAGATGCGTGATCCCACGGTGTCCGAAGGTGACGCATCGGGATCCGGTGAAGAAACTTTTAGCCCGACCGAGTTACTAACCAACAACGAAACTCCCGAGTCCGTGCTGATTTCGAAGGAAATCGTGCACACGGTGAATGCGGCGATGGAGTCTTTGCCCGATGATTTGCGCATGGCGATCACCTTGCGCGAGATCGAAGGCTTGAGTTACGAGGAGATTTCCGAGGTCATGCAATGCCCGATCGGCACGGTGCGGTCACGGATTTTCCGCGCCCGTGAGACGATTGCCGAGCGTTTGCGCCCCGTGATCGAACACAAGGGCGGCAAACGGTGGTGA
PROTEIN sequence
Length: 202
VEQDTQSDAVLVQQVQAGHQKSFDLLVAKYQRRIYRLVLRFIRDPALAEDVAQETFLRDYRDIGQFRGDSQFYTWLYRIAVNTAKKAISDEMRDPTVSEGDASGSGEETFSPTELLTNNETPESVLISKEIVHTVNAAMESLPDDLRMAITLREIEGLSYEEISEVMQCPIGTVRSRIFRARETIAERLRPVIEHKGGKRW*