ggKbase home page

OR_07102018_0_5m_scaffold_3213_3

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: 1910..2818

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=2 Tax=Thiomonas RepID=D5X6N5_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 302.0
  • Bit_score: 546
  • Evalue 1.10e-152
rpoH; RNA polymerase sigma-32 factor (Heat shock regulatory protein F33.4) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 302.0
  • Bit_score: 546
  • Evalue 3.10e-153
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 302.0
  • Bit_score: 546
  • Evalue 1.50e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomonas sp. CB2 → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGCCCAAACTCAGTCAGCCGCACTTGCACTGCGCTCTGCGCAGGTTGATGGTGCGTTTCCGCTCAGCCTGCCCAGCCTGGGCAATCTCGATGCCTACATCAGCGCGGTCAATCGCCTGCCGATGCTCAGCGCCGAGGAAGAGTCGCGGCTGGCGCATCGCTGGCGCGAGCAGGGCGACAAGGACGCCGCCGGAAAGCTGGTGCTCTCGCACCTGCGGCTGGTCGTGTCCACGGCGCGGCAATATCTCGGGTACGGCCTGCCGCATGCCGACCTCATCCAAGAGGGCAATATCGGTCTGATGAAAGCGGTCAAGCGCTTCGACCCGGCGCATGGCGTGCGGCTGGTGAGCTACGCCCTGCACTGGATCAAGGCCGAGATCCACGAATACATTCTGCGCAACTGGCGGCTGGTCAAGGTGGCCACGACCAAGGCGCAGCCCAAATTGTTTTTCAACCTGCGCTCGATGAAAACCGCCAATGCCGGCATGAACGACGCGCAGATCGACGACATGGCGCAGGCGCTTTCGGTCAAGCGCGAAGACGTGATCGAGATGGAAAGCCGCATGGGCGGTGCCGACATCGCGCTTGACCCCACGGTGGAGGATGGCGAAGAGAACTATGCGCCCATTTCCTACCTGGCCGACACCACCCAGGAGCCGGTGGCTGTGCTCGAAGCGCGCAGCCATGACCGGCTGCAGATCGAGGGCTTGGAGAGTGCGCTGGGACAGCTCGACCCCCGCAGCCGCGCCATCGTCGAAGAGCGCTGGCTGCAGGTGGCGGACGACGGCAGCGGCGGCAAGACCCTGCACGAACTGGCCGCCGAATACGGCGTGTCGGCCGAGCGCATCCGCCAAATTGAGGTGGCGGCGATGAAAAAGATGCGCAAGTCGCTGGCCGAATTCGCCTGA
PROTEIN sequence
Length: 303
MAQTQSAALALRSAQVDGAFPLSLPSLGNLDAYISAVNRLPMLSAEEESRLAHRWREQGDKDAAGKLVLSHLRLVVSTARQYLGYGLPHADLIQEGNIGLMKAVKRFDPAHGVRLVSYALHWIKAEIHEYILRNWRLVKVATTKAQPKLFFNLRSMKTANAGMNDAQIDDMAQALSVKREDVIEMESRMGGADIALDPTVEDGEENYAPISYLADTTQEPVAVLEARSHDRLQIEGLESALGQLDPRSRAIVEERWLQVADDGSGGKTLHELAAEYGVSAERIRQIEVAAMKKMRKSLAEFA*