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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_2288
Species: Thiomonas sp. CB2 (50%)
4 4033 bp 66.45 5.91 91.35
OR_07102018_0_5m_scaffold_15475
Species: Thiomonas arsenitoxydans (50%)
4 1087 bp 59.98 3.59 99.36
OR_07102018_0_5m_scaffold_2036
Species: Thiomonas intermedia (50%)
4 4447 bp 65.15 4.99 89.25
OR_07102018_0_5m_scaffold_4757
Species: Thiomonas sp. CB2 (50%)
4 2297 bp 58.12 5.88 79.80
OR_07102018_0_5m_scaffold_2550
Species: Thiomonas arsenitoxydans (50%)
4 3675 bp 65.74 6.29 97.31
OR_07102018_0_5m_scaffold_3666
Species: Thiomonas intermedia (50%)
4 2792 bp 63.22 5.86 87.89
OR_07102018_0_5m_scaffold_3412
Species: Thiomonas arsenitoxydans (75%)
4 3949 bp 67.97 6.08 96.40
OR_07102018_0_5m_scaffold_2817
Species: Thiomonas sp. CB2 (50%)
4 3390 bp 70.62 5.75 97.43
OR_07102018_0_5m_scaffold_5528
Species: Thiomonas intermedia (50%)
4 2074 bp 62.97 4.85 99.37
OR_07102018_0_5m_scaffold_5017
Species: Thiomonas arsenitoxydans (50%)
4 2211 bp 67.35 5.90 98.51
OR_07102018_0_5m_scaffold_3674
Species: Thiomonas intermedia (50%)
4 2788 bp 65.14 5.43 95.23
OR_07102018_0_5m_scaffold_1541
Genus: Thiomonas (50%)
4 5576 bp 67.45 5.19 93.83
OR_07102018_0_5m_scaffold_7614
Species: Thiomonas intermedia (75%)
4 1686 bp 67.08 6.58 96.09
OR_07102018_0_5m_scaffold_4007
Species: Thiomonas intermedia (50%)
4 2596 bp 67.84 5.20 100.08
OR_07102018_0_5m_scaffold_1799
Species: Thiomonas sp. CB2 (50%)
4 4904 bp 63.93 4.25 97.45
OR_07102018_0_5m_scaffold_3936
Species: Thiomonas arsenitoxydans (50%)
4 2639 bp 67.83 5.97 91.63
OR_07102018_0_5m_scaffold_3940
Genus: Thiomonas (75%)
4 2637 bp 65.53 6.03 96.25
OR_07102018_0_5m_scaffold_10589
Species: Thiomonas intermedia (50%)
4 1371 bp 62.87 4.92 95.40
OR_07102018_0_5m_scaffold_2578
Species: Thiomonas intermedia (50%)
4 3649 bp 62.54 5.22 86.24
OR_07102018_0_5m_scaffold_1810
Species: Thiomonas intermedia (75%)
4 4885 bp 66.88 5.59 95.07
OR_07102018_0_5m_scaffold_2070
Species: Thiomonas sp. CB2 (50%)
4 4375 bp 60.78 5.59 85.51
OR_07102018_0_5m_scaffold_1558
Species: Thiomonas intermedia (50%)
4 5521 bp 64.79 5.24 99.28
OR_07102018_0_5m_scaffold_3950
Species: Thiomonas intermedia (50%)
4 2628 bp 66.44 5.59 85.39
OR_07102018_0_5m_scaffold_3185
Species: Thiomonas sp. CB2 (50%)
4 3098 bp 64.27 6.63 85.89
OR_07102018_0_5m_scaffold_6983
Species: Thiomonas intermedia (50%)
4 1780 bp 62.25 5.14 80.06
OR_07102018_0_5m_scaffold_6473
Species: Thiomonas intermedia (50%)
4 1870 bp 63.53 5.29 93.05
OR_07102018_0_5m_scaffold_4291
Species: Thiomonas sp. CB2 (50%)
4 2470 bp 67.81 5.22 99.96
OR_07102018_0_5m_scaffold_6483
Species: Thiomonas sp. CB2 (50%)
4 1869 bp 59.66 4.90 84.75
OR_07102018_0_5m_scaffold_4299
Species: Thiomonas arsenitoxydans (50%)
4 2467 bp 63.23 4.74 89.02
OR_07102018_0_5m_scaffold_1839
Species: Thiomonas intermedia (75%)
4 4808 bp 65.08 4.90 98.90
OR_07102018_0_5m_scaffold_11377
Species: Thiomonas arsenitoxydans (75%)
4 1311 bp 63.16 3.66 93.14
OR_07102018_0_5m_scaffold_2868
Genus: Thiomonas (50%)
4 3330 bp 54.53 4.86 88.38
OR_07102018_0_5m_scaffold_2613
Species: Thiomonas arsenitoxydans (50%)
4 3606 bp 64.45 5.66 96.59
OR_07102018_0_5m_scaffold_17637
Species: Thiomonas arsenitoxydans (50%)
4 1002 bp 64.37 3.44 88.02
OR_07102018_0_5m_scaffold_3213
Species: Thiomonas intermedia (50%)
4 3080 bp 66.82 5.99 88.05
OR_07102018_0_5m_scaffold_3469
Genus: Thiomonas (50%)
4 2907 bp 61.99 5.62 90.71
OR_07102018_0_5m_scaffold_3471
Species: Thiomonas intermedia (75%)
4 2905 bp 60.41 6.45 83.13
OR_07102018_0_5m_scaffold_7155
Species: Thiomonas intermedia (75%)
4 1754 bp 64.20 4.19 93.39
OR_07102018_0_5m_scaffold_5334
Species: Thiomonas sp. CB2 (75%)
4 2121 bp 64.69 5.73 95.76
OR_07102018_0_5m_scaffold_6759
Species: Thiomonas arsenitoxydans (75%)
4 1822 bp 60.04 3.87 86.94
OR_07102018_0_5m_scaffold_6760
Species: Thiomonas intermedia (50%)
4 1821 bp 56.34 4.45 92.59
OR_07102018_0_5m_scaffold_1600
Genus: Thiomonas (50%)
4 5409 bp 64.78 6.21 93.12
OR_07102018_0_5m_scaffold_1857
Species: Thiomonas intermedia (66.67%)
3 4769 bp 64.35 5.06 100.08
OR_07102018_0_5m_scaffold_7930
Genus: Thiomonas (66.67%)
3 2885 bp 65.72 7.33 93.90
OR_07102018_0_5m_scaffold_6509
Genus: Thiomonas (100%)
3 1865 bp 68.79 4.75 99.41
OR_07102018_0_5m_scaffold_14790
Species: Thiomonas intermedia (66.67%)
3 1118 bp 61.00 3.76 93.11
OR_07102018_0_5m_scaffold_10903
Genus: Thiomonas (66.67%)
3 1346 bp 63.15 4.01 99.85
OR_07102018_0_5m_scaffold_3233
Species: Thiomonas arsenitoxydans (66.67%)
3 3064 bp 65.37 6.12 89.10
OR_07102018_0_5m_scaffold_14026
Genus: Thiomonas (66.67%)
3 1156 bp 68.25 6.10 94.46
OR_07102018_0_5m_scaffold_2379
Species: Thiomonas intermedia (66.67%)
3 3888 bp 66.62 5.63 99.07
Displaying items 251-300 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.