ggKbase home page

OR_08142018_2_5m_0_1um_scaffold_160_46

Organism: OR_08142018_2_5m_0_1um_Sphingobacteria_36_89

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(44266..45711)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I8J7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 462.0
  • Bit_score: 296
  • Evalue 4.10e-77
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 475.0
  • Bit_score: 296
  • Evalue 1.20e-77
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 306.0
  • Bit_score: 562
  • Evalue 4.30e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCCCAGTATTATACATTCTAAATGGTTTAATTGGTTTGCCATTGGCAGTTTCTTTTTATGTGGATTATGGTCGCTGCTAACGCAAGAACCCTACTGGCTTGCGCTACCATTTTTTTTAGTTTTAGCATTCCCACTCTTCCAATTCGTTGTTACCAAAACTGAACAACTCTATTGGTTATTGTTGATTGTGCTTCCCTTATCAACTGAATATAATTTCACGCCATCTTTAGGTTTAGATCTTCCCGATGAGCCCTTACTCATCGTTATATCAATCGCTGTATTTGCTAGTATATTGTACCAACCGGCCCAATACAAATTCATTTTTGTTTCGCCCATTTTTAGGTGGATCATTGCGCTCGTTATTTGGATGCTTATCAGTTTATGCTATGCACCTAATCAATGGTTGGCACTCAAATTCATTCTAGCTAAAACCTGGTATATTCTACCATTAGTATTGCTGACGGCATTAATACATTTAAGATCAAGCAATTTTAGAAAGACTGCGCTGTATATATGCATACCCATGTTATTGCTGGTGGTGCAAGCTTTAATTAGACATGCGTTTTATGGATTTGATTTTGTAGCCATTAAAAAAACAATGGGGCCTTTCTTTAGAAATCATGTGAACTATTCTGCCATGTTGGTTTGTCTAATTCCCATCGGCTTTCTCATCCATCATTTTACACAGGATCACCGCAAAAAAAAAATCATCAAGGCAGGAATTGCCATTGCATTAATAGGATTGTTCTTTGCGTATTCAAGAGGTGCATGGTTGGCATTAATAGTTGGCCTGATGGCTTACTGGTTCATCAAAAAAAATATACTCGGAAAAGCCATATTAGTTGGGATTATAACAATCTTCATAGCATTTGTTGCATTAATCAACAATAATCGTTTCATGCGTTTTGCTCCTGAACATGACCAAACTATTTTCCATGAGAATTTTTCGGAGCATTTAAATGCAACCATTGGTTTAAAAGATATTTCGAATGCAGAAAGAATCCATAGATGGGTGGCAGGTGTAAGAATGGTGGCTGAAAAACCTTGGACTGGATTTGGAGCCAATAGTTTTTTCAATAATTATCAACCCTATACTGCTGCACCTTTTAAAACATGGGTAAGCAATAATCCTGAACACTCCACAGTACATAATTATTTTCTGTTAATAGCGATTGAACAAGGTATACCTTCATTATTATTATTTACTGGCTTTTTTATTTTTTTATTATTACAAGCCCAGCAGCTTTTCCATAAATTTCAAAACAATTATTACCGCTCCATTTCTCTTGGATTGGGAATCATGTTACTCATGATTGCTTCACTTAATTTTACCAATGACTTAATTGAGACCGATAAAATAGGGGGATTGTTTTGGTTAGCAACTGGTATTTTGATTAGTTTGAAACAGCATCAACAAATTGAAAAAGAAGCATTAGCGAATTAA
PROTEIN sequence
Length: 482
MPSIIHSKWFNWFAIGSFFLCGLWSLLTQEPYWLALPFFLVLAFPLFQFVVTKTEQLYWLLLIVLPLSTEYNFTPSLGLDLPDEPLLIVISIAVFASILYQPAQYKFIFVSPIFRWIIALVIWMLISLCYAPNQWLALKFILAKTWYILPLVLLTALIHLRSSNFRKTALYICIPMLLLVVQALIRHAFYGFDFVAIKKTMGPFFRNHVNYSAMLVCLIPIGFLIHHFTQDHRKKKIIKAGIAIALIGLFFAYSRGAWLALIVGLMAYWFIKKNILGKAILVGIITIFIAFVALINNNRFMRFAPEHDQTIFHENFSEHLNATIGLKDISNAERIHRWVAGVRMVAEKPWTGFGANSFFNNYQPYTAAPFKTWVSNNPEHSTVHNYFLLIAIEQGIPSLLLFTGFFIFLLLQAQQLFHKFQNNYYRSISLGLGIMLLMIASLNFTNDLIETDKIGGLFWLATGILISLKQHQQIEKEALAN*