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OR_08142018_2_5m_0_2um_scaffold_708_8

Organism: OR_08142018_2_5m_0_2um_Hydrogenophilales_61_29

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 14 / 38 MC: 2
Location: 3894..7973

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 1359.0
  • Bit_score: 2540
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 1359.0
  • Bit_score: 2540
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037807C3 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 1359.0
  • Bit_score: 2552
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4080
ATGGCTTATACCTTTACCGAGAAAAAACGTCTGCGCAAGAGCTTTGCCAGCCGGACCAACACCCTACCGGTGCCTTTTCTTCTGGCGACCCAGCTTGAGTCCTATCGTGCCTTCTTGCAGGAAGGCCGCTCGCGTGAAGAGCGTTTGAACGAGGGCCTGCAGGCTGCGTTCACGTCGATTTTTCCGATCGAAAGCCACTCCAAAAACGCGCGCCTTGAATACGTCAGCTACTTTCTGGGCGAGCCGGTGTTCGACATCAAGGAATGCCAGCAGCGTGGCCTGACCTATTGCGCGCCGCTACGCGCCAAGGTGCGCCTGGTGATCATGGACAAGGAAGCGTCCAAGCCGACGATCAAGGAAGTCAAGGAGCAGGAAGTCTATATGGGCGAAATTCCGCTCATGACGCCGACCGGTTCCTTCGTCATTAACGGTACCGAGCGCGTGATCGTGTCTCAGCTGCACCGCTCGCCCGGCGTGTTCTTCGAGCATGACCGCGGCAAGACTCACAGCTCAGGCAAGCTGTTGTTTTCCGCCCGCGTGATTCCCTACCGCGGATCGTGGCTGGATTTCGAGTTCGATGCCAAGGATATCCTGTTCTTCCGCGTCGACCGCCGCCGCAAGATGCCGGTCACCATTCTGCTCAAATCGCTCGGGTATACGCCTGAGACGATTCTGGATGCGTTCTTCAACAAGGACACCTTCTATATCAATACGCAGGGAATCCAGTTCGAGTTGGTCCCCGAGCGTCTGCGCGGCGAACTTGCGCGCTTTGATATTTGCGGCAAAGATGACCATGTCATCGTGGCCAAGGATAAACGCATCACTGCCAAGCACATCCGTGAACTGGAAGCTGCAGGCGTCAAGAAATGGGCAGTCCCCGTCGAGTTCGTCGTTGGCCGCGTGCTGGCGCACGACGTGGTCGACAAGTCCACCGGCGAACTGGTTGCGCGAGCCAACGACGAGATCACTGAAGATATGTTGAATGCCCTGGCCGTTGCAGGCATCGACAAAATCAACACGCTGTATACCAATGAGCTCGATCAGGGGGCGTTCATTTCTCAGACCCTGCGCGCTGACGACGCAGCTGACGCCTATGTAGCCAAGGTTGCGATCTATCGCATGATGCGTCCTGGCGAGCCGCCCACCGAGGATGCCGTCAACACCCTGTTCACCAACCTGTTCTTCAACGATGAGCGCTACGATCTGTCCGCGGTGGGCCGTATGAAGTTCAACCGCCGCATCGGTAGCGATGCGTTGACCGGTCTCGGCACGTTGTCTACAGAAGACATCGTGGCTGTAATCAAGATTCTGGTGGATTTACGTAATGGTCGTGGAGAAGTCGACGACATCGATCACCTCGGTAACCGCCGTGTCCGTTCGGTAGGCGAACTAGCCGAGAATCAGTTCCGTGCCGGTCTGGTGCGGGTCGAGCGCGCCGTACGTGAACGTCTGGGGCAGGCCGAATCCGATAACCTGATGCCGCACGACTTGATCAACGCCAAACCGGTTTCGGCGGCGATCAAGGAGTTTTTCGGCTCCAGCCAGCTGTCGCAGTTTATGGACCAGACCAATCCGCTGTCCGAGATTACCCACAAGCGCCGCGTGTCGGCCCTTGGACCGGGCGGCTTGACGCGCGAACGCGCAGGCTTTGAGGTGCGTGACGTGCACCCGACCCACTATGGGCGTGTGTGTCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCACTGGCGCTGTATGCCCGCACCAACTGGTATGGCTTCATTGAGACGCCTTACCGCAAGGTAATCGACAACAAGGTGACCGATGAAATCGAATACCTGTCGGCGATTGAGGAAAGCAAGTATGTGATCGCGCAGGCCAACGCCGATCTCGACGCCAAGAATCAGTTCAAGGACGATCTGGTGTCATGCCGTTTCAAGAACGAATTCACGCTGTCAACGCCCGACCGCATCGAGTACATGGACGTTGCACCAGCGCAAATCGTATCGGTTGCCGCTTCGCTGATTCCGTTCCTCGAGCATGACGACGCCAACCGCGCCTTGATGGGCTCGAACATGCAACGTCAGGCCGTGCCTTGTCTGCGTCCGGAGAAATCCCTGGTGGGCACCGGAATCGAGCGCACCGCTGCGGTCGACTCCGGAACGGTTGTAACCGCACATCGCGGCGGCCGGGTTGACTACATCGACGCAAGCCGGATCGTGATTCGCGTGCATGACGAAGAGGCCCGTGCTGGTGAGGTCGGCGTGGATATTTATTCGCTGATCAAGTACACGCGCTCCAACCAGAACACCAACATCAACCAGCGTCCGCTGGTGAAAGTGGGCGACATGATTGCGCGCGGCGACGTGATTGCCGACGGCGCCTCGACCGATATGGGCGAACTGGCGCTGGGACAGAACATGCTAGTCGCCTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATTCTGATCAATGAGAAGGTGGTGGCAGAAGACCGCTATACCTCGATCCACATCGAAGAACTGTCGGTGGTGGCACGCGACACCAAACTGGGCGCGGAAGAGATCACTCGCGACATCTCCAATCTGGCCGAGCGACAGTTAGGCCGTCTGGACGAGTCCGGCATCATCGCCATCGGCGCTGAAGTTGAAGCCGGCGACGTGCTGGTCGGCAAGGTTACCCCCAAGGGCGAAACCCAGCTGACGCCGGAAGAAAAACTGCTGCGCGCGATCTTTGGCGAAAAGGCCAGCGACGTGAAAGACACCAGCCTGAAAGTGCCGTCCGGCATGTCGGGCGTGGTGATCGATGTGCAGGTGTTCACCCGCGAAGGCATTGAGCGCGACATACGCGCGCAATCGATTGTCGACACGCAGCTGGCCGAATACCGCAAGGACATGACCGACCGCATGCGTATCGTTGAGGACGATACGTTTGCCCGTCTGGAAAAACTGTTGCACCTGAAGGTGGCCAACGGCGGTCCGAAGAAGCTCGCCAAGGGCAGCAAGATCACCAATGACTACCTGGAGTCGGTCAATCGCCATGACTGGTTCGACATTCGTCTGGCTGACGACGAAGCCAGCCGTGCGGTTGAGGGCCTGAAAGATAGCCTGACCCAGAAGCGCATCGAGTTCGATGCGATGTTTGAAGAGAAGAAGAAGAAGCTGACCGCTGGCGACGAACTGCCGCCCGGCGTGCAGAAGATGGTCAAGGTCTACCTAGCGGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGTAACAAGGGTGTGGTGTCGAAGATCGCGCCGGTCGAAGACATGCCGTTCATGGCAGATGGCCGTCCAGTCGATGTGGTGCTGAACCCGCTCGGCGTGCCATCGCGGATGAACGTCGGCCAGATTCTGGAAACCCATCTCGGCTGGGCGGCTAAAGGTCTGGGCGAGAAAATCGGCCAGATGCTGGCCGCGCAGACCAAGACAATGGTGAAAGAGCTGCGCAGCTTCCTTAAGGAAATCTACAACCAGTCAGGCAAGATCGAAGATATCGACAGCTTTACCGATGACGAAATCATCGAACTCGGCCGCAACCTGCAGAAGGGCGTGCCGTTCGCATCGCCCGTATTTGACGGCGCATCCGAAGCCGAGATTCGCCGCATGCTGGTGCTGGCTGGTCTACCCGAAGGCGGCCAGGTCACGCTGTACGATGGCCGCACCGGCGAGGCGTTTGATCGCCAGGTGACGGTTGGCTACAAGCACGTGCTGAAGCTGCATCACTTGGTCGACGACAAGATGCACGCGCGTTCCACCGGCCCGTACTCGCTGGTCACCCAGCAACCGCTGGGCGGCAAGGCGCAGTTCGGCGGTCAGCGCTTTGGTGAGATGGAGGTGTGGGCGCTGGAAGCCTATGGCGCCTCTTACGTGCTGCAGGAAATGCTGACCGTGAAGTCGGATGATGTGAACGGCCGTACCAAGATGTACGAGAGCATCGTCAAGGGCGAGCACAAGATTGAGGCAGGCATGCCGGAGTCCTTCAACGTGCTGGTGAAGGAAATCCGCTCGCTGGGCATCGACATCGATCTGGAACGTTATTAA
PROTEIN sequence
Length: 1360
MAYTFTEKKRLRKSFASRTNTLPVPFLLATQLESYRAFLQEGRSREERLNEGLQAAFTSIFPIESHSKNARLEYVSYFLGEPVFDIKECQQRGLTYCAPLRAKVRLVIMDKEASKPTIKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDAKDILFFRVDRRRKMPVTILLKSLGYTPETILDAFFNKDTFYINTQGIQFELVPERLRGELARFDICGKDDHVIVAKDKRITAKHIRELEAAGVKKWAVPVEFVVGRVLAHDVVDKSTGELVARANDEITEDMLNALAVAGIDKINTLYTNELDQGAFISQTLRADDAADAYVAKVAIYRMMRPGEPPTEDAVNTLFTNLFFNDERYDLSAVGRMKFNRRIGSDALTGLGTLSTEDIVAVIKILVDLRNGRGEVDDIDHLGNRRVRSVGELAENQFRAGLVRVERAVRERLGQAESDNLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARTNWYGFIETPYRKVIDNKVTDEIEYLSAIEESKYVIAQANADLDAKNQFKDDLVSCRFKNEFTLSTPDRIEYMDVAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKSLVGTGIERTAAVDSGTVVTAHRGGRVDYIDASRIVIRVHDEEARAGEVGVDIYSLIKYTRSNQNTNINQRPLVKVGDMIARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILINEKVVAEDRYTSIHIEELSVVARDTKLGAEEITRDISNLAERQLGRLDESGIIAIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLKVPSGMSGVVIDVQVFTREGIERDIRAQSIVDTQLAEYRKDMTDRMRIVEDDTFARLEKLLHLKVANGGPKKLAKGSKITNDYLESVNRHDWFDIRLADDEASRAVEGLKDSLTQKRIEFDAMFEEKKKKLTAGDELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIAPVEDMPFMADGRPVDVVLNPLGVPSRMNVGQILETHLGWAAKGLGEKIGQMLAAQTKTMVKELRSFLKEIYNQSGKIEDIDSFTDDEIIELGRNLQKGVPFASPVFDGASEAEIRRMLVLAGLPEGGQVTLYDGRTGEAFDRQVTVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKMYESIVKGEHKIEAGMPESFNVLVKEIRSLGIDIDLERY*