ggKbase home page

OR_06102018_0_5m_0_1um_scaffold_845_6

Organism: OR_06102018_0_5m_0_1um_Halothiobacillus_54_31

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(5965..6657)

Top 3 Functional Annotations

Value Algorithm Source
Electron transport protein SCO1/SenC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVG5_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 228.0
  • Bit_score: 142
  • Evalue 4.80e-31
Uncharacterized protein {ECO:0000313|EMBL:KHD04448.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 207.0
  • Bit_score: 159
  • Evalue 3.10e-36
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 214.0
  • Bit_score: 142
  • Evalue 7.90e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAACCCACAAAAACCCCCTAAATCTGGTCGCAAACTGATCCTGGTTGCCGCCCTTGCCGGCGCCGTATTAATTGGTTTAAGCACCATGCTCATTCCTAAATTTATTGGGCCTGCCGCCACCCAAGCGCCCGTATACAACACCGAGGCATTTCGCCCCATGCCGGGTCCTATACCCGTGCCAAACGTTGCATTAACAGATATGCATGGCAAACCCTTTACCGCAGAAAACTTCAAGGGCAAATGGACTTTTCTCTATTTTGGTTACACCTTATGCCCCGATGTCTGCCCGGTCGAGCTCACCGCTTTAGCCCATGTGGCTCAGGATCTGCGCGCCCATCCCCCCAGTAAACCGGTTGATTGGCAAATGGTGTTTATCTCCGTTGATCCCGATCGCGACACGCTGGAAAAAATCAAACAATTTGTCACGTACTACGACCCTGCCATTATCGGCGCAACAGGCACCGAACCCATGCTGCGCGATATTGCAACGCCCTTGGGCGCAGGCTGGGAAAAAACAGGGCTTGAAATGGACAATGGCAAAATGGCGGGGGGCACTTATTTCATCAACCACACCACCACAATTTTCTTAGTGAACCCTGCAGGGCAAATGGTGGCCGTGTTTCCCACGCCCCATAATCCAAATCTCATGGCAACGGCCTTCAAGCAGTGGATTAGCCACCACGCCCAATAA
PROTEIN sequence
Length: 231
MNPQKPPKSGRKLILVAALAGAVLIGLSTMLIPKFIGPAATQAPVYNTEAFRPMPGPIPVPNVALTDMHGKPFTAENFKGKWTFLYFGYTLCPDVCPVELTALAHVAQDLRAHPPSKPVDWQMVFISVDPDRDTLEKIKQFVTYYDPAIIGATGTEPMLRDIATPLGAGWEKTGLEMDNGKMAGGTYFINHTTTIFLVNPAGQMVAVFPTPHNPNLMATAFKQWISHHAQ*