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OR_06102018_0_5m_0_1um_scaffold_948_7

Organism: OR_06102018_0_5m_0_1um_Halothiobacillus_54_31

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(3572..5080)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYS7_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 502.0
  • Bit_score: 839
  • Evalue 1.80e-240
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 502.0
  • Bit_score: 839
  • Evalue 5.00e-241
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 502.0
  • Bit_score: 839
  • Evalue 2.50e-240

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGAAGGCTGGCTTAGAGCTTCGTTTTGGCCAAAATTTGGCGATGACGCCGCAATTGCAGCAATCCATTCGCCTGCTGCAATTATCAACGCTCGAACTCGCACTTGAAATTCAGCAAGCGGTTGATACCAACCCCCTCCTTGAACTTGTTGAAACCGAAGAATTTGGCGATCGCGATGAGGCATTTGCTGAAACCAGTGATACCGCCTTAAGCTTGGATACCATCCTTCAAGCCGATCCCAATGCACAATCGGGCGAAGCCTTGCTTGAACCCAATCATGAGCTAACGCCTGATGATCCCTTCGCGCTCGATACCCACTGGGAAGATTATTTCGAAGCCGATGGCAGCACAAGTTACAGCGCAGGAGAGCAAAATCACGATGAGTACGACCCCTACGCCACCACATCAAACGGCGCAGAATCGCTCCGCGATCATCTCTTAAGCCAAATCCACCTAACCCACCTAACGCCCCGCGATACCGCCATTGCCACCGCCATTATTGAATCCATCGATCCCACCGGCTACCTTGCCGACACCCTCGAAGAAATTCAAACCGTGCTGGCAACCGATTGGCCCAATATTGCCCTAGCCGACGTAAACACCGCTTTGCATTTAGTGCAATCACTCGATCCCATCGGCATTGGCGCGCGTGATTTAAATGAATGTTTAAGCCTGCAACTGCGCCAAAAGCCCAGCGATACGCCCTACAAAAACGTGGCGCTGCAAATTTGCGAACGCAATTTAATTGAAGCCATCGCCCAGCGCGAATATGCCCAAGTTTTGCGCGCGTTAACGATTGATCAGGCCACGCTTGAAGGCGCGCTTATGCTGCTGCAGGGGTTAAACCCAAGGCCTGGCGCCTCGGTGGGCAGCACGGCGGCCGACTACCTCATTCCCGATGTCTTAGTGAGCCTGCGCATGGGTCAATGGCAAGTGGATTTAAATCCTGAAATTGCGCCCAAATTACGGGTGAACCAAACCTACGCCCGCATGATTAACCGCAGCTCACGCGGGGAAGATGCCAGCTACATTCGAAGCCACTTGCAAGAAGCCCGCTGGTTTATTAAAAGTTTACGCAGCCGCAACGAAACCTTGCTTAATGTGGCGCGCGCCATCGTGGCTCGGCAAACCGCTTTTTTTGAGCAAGGTGACACGGGCATGCGCCCATTAGTGCTGCGTGAAATTGCCGAAGAGCTTGAACTGCACGAATCGACGGTGAGCCGGGTCACCACCCAAAAATACATGCTGACCCCGCGCGGCACCTTTGAATTTAAATACTTTTTTTCAAGTCATGTCGGCACAAGTGATGGCGGCGAATGTTCCGCCACCGCCATTCGCGCCATGATAAAAAAATTGGTCAGCGAAGAGGATCCGCGCAAACCCATGTCGGATGCCAAAATTGCCGATCTATTGATTGAACAAGGAATAGATGTCGCTAGGCGAACGATCGCCAAGTACCGTGAGGCAATGGGCATTGCCTCGTCCACTGACCGTAAGCGCCTAATTTAA
PROTEIN sequence
Length: 503
MKAGLELRFGQNLAMTPQLQQSIRLLQLSTLELALEIQQAVDTNPLLELVETEEFGDRDEAFAETSDTALSLDTILQADPNAQSGEALLEPNHELTPDDPFALDTHWEDYFEADGSTSYSAGEQNHDEYDPYATTSNGAESLRDHLLSQIHLTHLTPRDTAIATAIIESIDPTGYLADTLEEIQTVLATDWPNIALADVNTALHLVQSLDPIGIGARDLNECLSLQLRQKPSDTPYKNVALQICERNLIEAIAQREYAQVLRALTIDQATLEGALMLLQGLNPRPGASVGSTAADYLIPDVLVSLRMGQWQVDLNPEIAPKLRVNQTYARMINRSSRGEDASYIRSHLQEARWFIKSLRSRNETLLNVARAIVARQTAFFEQGDTGMRPLVLREIAEELELHESTVSRVTTQKYMLTPRGTFEFKYFFSSHVGTSDGGECSATAIRAMIKKLVSEEDPRKPMSDAKIADLLIEQGIDVARRTIAKYREAMGIASSTDRKRLI*