ggKbase home page

OR_06102018_0_5m_0_1um_scaffold_11434_1

Organism: OR_06102018_0_5m_0_1um_Halothiobacillus_54_31

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(2..1702)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 567.0
  • Bit_score: 1026
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYB4_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 567.0
  • Bit_score: 1026
  • Evalue 0.0
DNA polymerase III subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 567.0
  • Bit_score: 1026
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1701
CACCTACCGGTGGTTGCCACCAACGATGTGCGCTTTTTAGATGAAGCCGATTTTGATGCGCATGAAGTGCGCGTGTGTATTCAGCAAGGCCGCACGCTAGATGATCCGCGCCGCCCGCGAGAATACACACCGCAACAATATGTGCGCTCAGCCGCTGAAATGGCGGCTTTATTTAGCGATATTCCCGAAGCCCTTGCCAACAGCATAGCCATTGCCGAACGCTGCAATGTGACCTTACAACTCGGTAAAAACTTTTTACCAAACTTTCCCACCCCGAACGGGGAAACAGAAGCCGATTTTTTACGCAGCTTAAGCGAGCAGGGTTTGGCGGAGCGTTTTGCCCGCGTGCCCGCCCCGCAGCATGAAGCCTACCGCGCGCGGTTAGCGATTGAGCTTGATGTAATTATCCAGATGGGGTTTCCGGGTTATTTTTTAATCGTGGCCGATTTCATCCAGTGGGCGAAGCGTCAAAACATTCCGGTGGGGCCTGGGCGGGGTTCGGGCGCGGGTTCGCTTGTTGCTTGGGCGTTGTTAATTACTGATATTGACCCGATTCCCTACGATTTGCTATTTGAGCGATTTTTGAACCCCGAACGGGTTTCTATGCCCGATTTTGATATTGATTTTTGCATGGAAGGCCGCGATCGGGTGATTGATTATGTGGCCGAGCGTTATGGCCGAGCGGCGGTGTCGCAAATTGCCACCCACGGCACCATGGCCGCCAAAGCGGTGGTGCGGGATGTGGGCCGCGTGATGAGCTACCCCTATGGTTTTGTTGATAAAATCGCCAAACTCATCCCCATGAAACCCGGGCTCGATGTCACACTAGAAGATTCACTGGGGCGCACCGAGCGCTCACAAAAAGAACCCGAGCGCTTCTCGCAAGAGTTTCGTGATTTGTACGAGCGCGATGAAGAAGTGCAAGCCATTGTCGATATGGGCATCGCCCTTGAGGGCTTATCGCGCAATGTGGGCAAGCACGCGGGCGGGGTAGTGATTGCGCCGAGCAAGCTTACCGATTTCACCCCCATGTATTGCGAGGCTAATGGTGCCTCGGCGGCCTCGCAGCTCGATAAAGATGATGTGGAAGCCGTGGGTTTGGTTAAATTCGACTTTCTCGGGCTGCGCAATCTCACCATTATCGATTGGGCGCTAACCGCGATTAATGCAACGCGCAAGGCGGGTGGCCTTGAACCCATCGACATCACCGCCATCCCGCTTGATGATAAAGCCAGCTTTGCCTTGCTTAAACGTTGTGAAACCACGGCTGTTTTCCAGCTTGAATCACGCGGCATGAAAGACCTCATTCGCCGCCTTCAGCCCGATAGTTTTGAGGACATTATCGCGCTGGTCGCTTTATTTCGCCCAGGCCCCTTGCAATCGGGCATGGTAGACGATTTTATCTTGCGAAAAAAAGGCGAGCAGAAAATCGAGTATTTGCATCCTTGGCTCACCGATGTGCTCAAACCCACCTATGGCGTGATTGTGTACCAAGAGCAGGTCATGCAAATTGCCCAAATTTTAGCGGGCTACACCCTAGGCGGCGCCGATTTACTGCGCCGCGCCATGGGCAAGAAAAAAGCCGAAGAAATGGCCGAGCAGCGGGCAATTTTCTTGGCGGGCGCCAAGGCCAAAGAAGTCAATCCCGATCAAGCGGGGCATATCTTTGATTTAATGGAAAAATTCGCCGGCTACGGGTTT
PROTEIN sequence
Length: 567
HLPVVATNDVRFLDEADFDAHEVRVCIQQGRTLDDPRRPREYTPQQYVRSAAEMAALFSDIPEALANSIAIAERCNVTLQLGKNFLPNFPTPNGETEADFLRSLSEQGLAERFARVPAPQHEAYRARLAIELDVIIQMGFPGYFLIVADFIQWAKRQNIPVGPGRGSGAGSLVAWALLITDIDPIPYDLLFERFLNPERVSMPDFDIDFCMEGRDRVIDYVAERYGRAAVSQIATHGTMAAKAVVRDVGRVMSYPYGFVDKIAKLIPMKPGLDVTLEDSLGRTERSQKEPERFSQEFRDLYERDEEVQAIVDMGIALEGLSRNVGKHAGGVVIAPSKLTDFTPMYCEANGASAASQLDKDDVEAVGLVKFDFLGLRNLTIIDWALTAINATRKAGGLEPIDITAIPLDDKASFALLKRCETTAVFQLESRGMKDLIRRLQPDSFEDIIALVALFRPGPLQSGMVDDFILRKKGEQKIEYLHPWLTDVLKPTYGVIVYQEQVMQIAQILAGYTLGGADLLRRAMGKKKAEEMAEQRAIFLAGAKAKEVNPDQAGHIFDLMEKFAGYGF