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OR_06102018_0_5m_0_1um_scaffold_23394_1

Organism: OR_06102018_0_5m_0_1um_Halothiobacillus_54_31

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(2..724)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 241.0
  • Bit_score: 308
  • Evalue 4.30e-81
tRNA pseudouridine synthase D n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZW1_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 241.0
  • Bit_score: 308
  • Evalue 3.10e-81
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 241.0
  • Bit_score: 308
  • Evalue 8.70e-82

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAGCGCCGCTGAAGGTCCATTGAGCGATTTAGCGCGGTTGCTCGAACCGCCCTTATTGCGCGGTGTGCTCAAACAATCGCCCGCCGATTTTCGGGTGGATGAGGTCTTGGGCTTTGAGCCCGATGGCGAAGGCCCTCATGGGCTTTTTCTCATTGAAAAAACCGGTATGACCACGGGGCATCTGTTAGGCGCCTTATCGAAAATCTCGCGGGTGCCTGAACGGGATATTGGTTTTTGCGGATTAAAAGATAAGCAAGCGGTCACCACGCAATGGTTTAGCCTGCCATTGCCGCCTAAACACCCACCCCACACAGACCCCGACTGGTTTGCCGCGTTGCCCAATGGCGTGCGCGTGGTTCGCTGGGCGCCGCATCGTAAAAAAATTCGGCGGGGGATTCATCAAGGCAATCGGTTCACCCTCGTAATTCATGGCGTGACGGGTGAAGATGCGGGGTTTGATCACCGGTTGGCAACCTTAAATCAGCATGGGTTTCCTAATTATTTTGCCGAGCAGCGCTTTGGTCATCAGGGCGGGAATTACAATTTACTGCATAAAATTGCTGCGATACCTGCCGAGCAGAGCGCCTCGATTAGTCGAGCGGATCGAAATTGGGGCTTATCGACCCTGCGGGCAGAACTATTTAATCACTGCTTATCGCAACGGCTTGCCCAGCGATCCGATGTGCTTGCTCAGGTGGGCGATTTGGCGCAATTGGCGGGC
PROTEIN sequence
Length: 241
MSAAEGPLSDLARLLEPPLLRGVLKQSPADFRVDEVLGFEPDGEGPHGLFLIEKTGMTTGHLLGALSKISRVPERDIGFCGLKDKQAVTTQWFSLPLPPKHPPHTDPDWFAALPNGVRVVRWAPHRKKIRRGIHQGNRFTLVIHGVTGEDAGFDHRLATLNQHGFPNYFAEQRFGHQGGNYNLLHKIAAIPAEQSASISRADRNWGLSTLRAELFNHCLSQRLAQRSDVLAQVGDLAQLAG