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OR_07112018_10m_0_1um_scaffold_179

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_179_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26939..27235
DNA (297bp) protein (99aa)
Putative uncharacterized protein id=1326655 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_31
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27251..27709)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EA730
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_32
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27713..28189)
DNA (477bp) protein (159aa)
transcription elongation factor GreA n=1 Tax=Thiobacillus thioparus RepID=UPI0003626F6A
GreA/GreB family elongation factor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_33
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28224..31430)
DNA (3207bp) protein (1069aa)
carbamoyl phosphate synthase large subunit n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E22E
carbamoyl-phosphate synthase large subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_34
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31433..32572)
DNA (1140bp) protein (380aa)
carbamoyl phosphate synthase small subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC0E
carbamoyl-phosphate synthase small subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_35
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32711..32965)
DNA (255bp) protein (85aa)
glutaredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BF7B3
glutaredoxin 3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_36
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32984..33787)
DNA (804bp) protein (268aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=12492969 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dihydrodipicolinate reductase (EC:1.3.1.26)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_37
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33784..34410)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376C633
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_38
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34444..34890
DNA (447bp) protein (149aa)
Fur family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003675794
ferric uptake regulator family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_39
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34881..35699)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368E337
substrate-binding periplasmic (PBP) ABC transporter protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_40
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35756..36352)
DNA (597bp) protein (199aa)
alpha-ribazole-5`-phosphate phosphatase CobC; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=12492972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alpha-ribazole-5'-phosphate phosphatase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_41
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36349..37473)
DNA (1125bp) protein (375aa)
gamma-glutamyl kinase (EC:2.7.2.11)
gamma-glutamyl kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003636C46
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_42
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37470..37976)
DNA (507bp) protein (169aa)
Putative lipoprotein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJS8_THIDA
lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_43
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38293..38877)
DNA (585bp) protein (195aa)
Putative uncharacterized protein id=1353830 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_44
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38900..40231)
DNA (1332bp) protein (444aa)
Putative ferredoxin id=1353831 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ferredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_45
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40321..40740)
DNA (420bp) protein (140aa)
rubrerythrin n=1 Tax=Thiobacillus thioparus RepID=UPI00036724A4
oxidative stress related rubrerythrin protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_46
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40975..41391
DNA (417bp) protein (139aa)
methionine sulfoxide reductase B (EC:1.8.4.11)
methionine sulfoxide reductase B n=1 Tax=Thiobacillus thioparus RepID=UPI00036C3F71
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_47
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41395..42099
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003668F16
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_48
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42185..43120
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373042E
hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_49
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43123..43467)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A858B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_50
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43478..44911)
DNA (1434bp) protein (478aa)
DEAD/DEAH box helicase id=12497258 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DEAD/DEAH box helicase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_51
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44954..45712)
DNA (759bp) protein (253aa)
beta-lactamase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB63D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_52
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45712..46827)
DNA (1116bp) protein (372aa)
NlpBDapX family lipoprotein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CCE4D
lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_53
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46882..47757)
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000367EEE5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_54
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48056..48724
DNA (669bp) protein (223aa)
phosphoserine phosphatase (EC:3.1.3.3)
phosphoserine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FEDE3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_55
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48904..51123
DNA (2220bp) protein (740aa)
Putative esterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC1_THIDA
esterase
Putative esterase {ECO:0000313|EMBL:AAZ97965.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_179_56
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51364..52329
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003704D88
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_179_57
unknown

Not on your lists

comp(52629..52853)
DNA (225bp) protein (75aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_179_58
unknown

Not on your lists

comp(53178..53375)
DNA (198bp) protein (66aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_179_59
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53663..55558
DNA (1896bp) protein (632aa)
Probable potassium transport system protein kup n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9C4_9PROT
K+ transporter
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Displaying items 31-60 of 69 in total

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