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OR_07232018_dam_0_1um_scaffold_1195_1

Organism: OR_07232018_dam_0_1um_Halothiobacillus_54_56

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1..1320)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VF27_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 444.0
  • Bit_score: 231
  • Evalue 1.10e-57
Multidrug resistance outer membrane protein MdtP {ECO:0000313|EMBL:KFZ90804.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 427.0
  • Bit_score: 241
  • Evalue 1.20e-60
putative Integral outer membrane protein TolC, efflux pump component similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 443.0
  • Bit_score: 218
  • Evalue 2.20e-54

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Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGCGCGCAGGCGGGTTGCATCGAATTAAACCACCCCAATGGGGGCGGGTGGCCTTTTTGGCCTTAAGCGGGTTGCTCACGGGTTGCGCGGCCTATCGCCCCTTGGTTTTGCCGCAGCAACCTGAATTTGTGGCCATAACCCCCGCGCAAAGCACGCAAACCATTCAGACGCCGCCCGTGCTTTCTTTAACGACGCTGCAAGCGCTTGTGCTGCACAATAACCCTGAACTTAAAGCGGCCAAATTCGGCGCGGTATTGGCCGCTGCCCGCACGCGCCAAGCGGGCAGCTTGCCGGATCCTACCTTAAATTTAACCCGCGATACCCCCTTAAATGGCGTGGGTTTAATTAGTGCGATGAATCAGGCCATTAGCATGGATTTATCGGCCCTTATTTCTCGTAAAGACCGCTTAAATGCCGCCAAAGCGGCGCAAATTCAGCAAGAATTGAACTACAGCTGGCTGGCATTAACGACCCAAATTAAAGCCAGCGATTTATATATTCAGCAGGTGGCCAATGGCGCGCAAATCCACGTTTTAACCGGGGAGCGTGGCGAGCTCAATGCCCGCCTACAGCAAAGTCAGGCGGCCTTGGATCGGGGGTATATCACCCAAGATCGGGTCGTGGCTGATGTGGTGCGCGCGGCAGATTTGGCGCGGCAGGTGGATGTATTGCAACTGACAGCAACCCAAATGCGCCAGCAAATGAATGCTTTGATGGGCGCCGCGCCCGACACGGCGTGGCAAACCCAAGGTTGGCCTAAAATTATCGAGCCTTCTGCCCCCGAGCAATCGGCACGATTGGCGCATTTGGCCTCTCATCGCGCTGATTTGCTGGCTTTGCGGGCGGGGGTGCTGCAAGCCGATGCCCAGTATCGGGCGGCTCTATTGCAGCAGTTTCCCGGTTTAACTTTGGGGGTTAGCCACGCAAACGACACCAGCAACGTGCAAACCGCCGGGTTGAGCTTGGGGTTAACGCTCCCGATTTTTGGCAGTGCCCAGGCGGGGGCGGCATTAGCCCAAGCAACCCGGGCGCAGCTGAATGCCGAGTTGCAGGCACGAATTAACCAAGCGGTGAGTGATGTGGCCTCGGTGCAAAGCATGCTGGCGGCTTATCGGGCGCGCTTAACGCAAATTGAGGCGCGTTTACCAGTGCTCGAAAAAACGGCGGCCAATGCGCAAACGGCGTTAAATGCGGGCTATTTTTCGGCGGGGTCTTATCTCGCGGTGCGCGCCACCTTAACCGCCGAGCAACTCAATGCCATTCAAACGCGCCAAGCCATTATTCAAGCACAGCTGGCCTTGCGGGGTGTGCTCGGCCTA
PROTEIN sequence
Length: 440
MRAGGLHRIKPPQWGRVAFLALSGLLTGCAAYRPLVLPQQPEFVAITPAQSTQTIQTPPVLSLTTLQALVLHNNPELKAAKFGAVLAAARTRQAGSLPDPTLNLTRDTPLNGVGLISAMNQAISMDLSALISRKDRLNAAKAAQIQQELNYSWLALTTQIKASDLYIQQVANGAQIHVLTGERGELNARLQQSQAALDRGYITQDRVVADVVRAADLARQVDVLQLTATQMRQQMNALMGAAPDTAWQTQGWPKIIEPSAPEQSARLAHLASHRADLLALRAGVLQADAQYRAALLQQFPGLTLGVSHANDTSNVQTAGLSLGLTLPIFGSAQAGAALAQATRAQLNAELQARINQAVSDVASVQSMLAAYRARLTQIEARLPVLEKTAANAQTALNAGYFSAGSYLAVRATLTAEQLNAIQTRQAIIQAQLALRGVLGL