ggKbase home page

OR_08142018_0_5m_0_1um_scaffold_46_44

Organism: OR_08142018_0_5m_0_1um_Sphingobacteria_36_172

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 52444..53151

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y411_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 230.0
  • Bit_score: 334
  • Evalue 6.70e-89
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 230.0
  • Bit_score: 334
  • Evalue 1.90e-89
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 459
  • Evalue 1.50e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGAATTTAGCCTTACTCAGATCTGAAATGAAACCAATGGATACCAGTTCCTTGGTTGATAAAGTGGAAGAAAGCTTGGTAGACCTACTTCAAAAGCGCAAACTTTCGGTGGGAGATGTGATACCCAAAGAGATGGAATTAGCAGAAACATTAGGAGTAAGTAGAACGGTTATTAGAGAAGCATTAACGCGCTTGCGTTTGATGGGTTTAATAGAATCAAAAAAGAAGAAAGGGTCTGTTATTACTAGCCCTGATATTTTTGGGATGATGAGTAAGAGTATGAATCCACATATTCTTGCACCAGAAACATTAAAAGAAATTTTTGAAATACGTTTAGTCTTAGAAATTGGTATGGCTGATTTGTTGTTTCATAGAATTACCAAAGAAGATATTGCTGCATTAAGACAAATTGTTGCAGACGAACCTCCTGCTACTCAATACCATTTATTCAATATTGAACACGAGATAGCTTTTCATGGTAAGCTCTACGAAATCACTGGTAACGCTACTTTGAAGCGTTTCCAAAAAATGTTACTACCTGTTTTTGATTATGTACACAATAGTGGTTTGTTGAAAAAACAACCCATGTTAAAAATGTTCGTATCGCACAAAGAGTTAGTAGACTTTTTAGAAAATGGAACTCCAGAAGAATTTAGAAATGGTATGCGCTCGCATTTAGAAAACCACTTTACCAGGTTGTTTGAGTGA
PROTEIN sequence
Length: 236
MNLALLRSEMKPMDTSSLVDKVEESLVDLLQKRKLSVGDVIPKEMELAETLGVSRTVIREALTRLRLMGLIESKKKKGSVITSPDIFGMMSKSMNPHILAPETLKEIFEIRLVLEIGMADLLFHRITKEDIAALRQIVADEPPATQYHLFNIEHEIAFHGKLYEITGNATLKRFQKMLLPVFDYVHNSGLLKKQPMLKMFVSHKELVDFLENGTPEEFRNGMRSHLENHFTRLFE*