ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_4005_2

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: 356..934

Top 3 Functional Annotations

Value Algorithm Source
fimbrial protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DFFB2 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 192.0
  • Bit_score: 322
  • Evalue 2.80e-85
type IV pilus assembly protein PilN similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 192.0
  • Bit_score: 316
  • Evalue 3.30e-84
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 192.0
  • Bit_score: 348
  • Evalue 3.90e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGATCCGCATTAACCTACTCCCCCACCGCGAGCTGGCCCGTGCTTCACGTCGTCGCCAGTTCACCGTTCTGCTAAGTGTTGCCGTGATTGCCGGCGTGGTAACCGTTATCTTGGGGCATGCCGTGATTGCTGCCCGGCAGTCGAATCAGGATGCACGCAACGCCTTTCTAACGCAGGAAATCGCCAAACTGGATAGCCAGATTGGCGAAATCAAGAAAATCCGCGAACAGACCCAGGCTTTGCTGGCGCGCAAGCAGGTTGTCGAAACGCTGCAATCCAACCGCACCGAAGTCGTCCACCTGTTCGACCAGATGATCCGTCTGCTGCCCCAGGGCCTGTACCTCAAGTCCTTCAAGCAAGCGGGCGATGTGGTCACCATCTCGGGTTATACCCAGTCCAGCGCACGTGTTTCCACCTTGATGCGCGCACTCGACGACTCGCCCTGGTTCGAGTCGGCCAGTCTGGTTGAAATCAAGTCCGCCACAGTGAACAACATGCGAGCCAACGAGTTTGTTTTGACGGTGAAGCAAACGCGCCAGCAGCTTGACGACGCAACCGATAAGGGGGGCAAAGCATGA
PROTEIN sequence
Length: 193
MIRINLLPHRELARASRRRQFTVLLSVAVIAGVVTVILGHAVIAARQSNQDARNAFLTQEIAKLDSQIGEIKKIREQTQALLARKQVVETLQSNRTEVVHLFDQMIRLLPQGLYLKSFKQAGDVVTISGYTQSSARVSTLMRALDDSPWFESASLVEIKSATVNNMRANEFVLTVKQTRQQLDDATDKGGKA*