ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_3529_2

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(846..2105)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12496042 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 419.0
  • Bit_score: 788
  • Evalue 2.30e-225
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 419.0
  • Bit_score: 773
  • Evalue 2.80e-221
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 419.0
  • Bit_score: 812
  • Evalue 1.60e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTATCTTTCCGAACTCAAGCAAAAGCCCATTACCGAGCTCCTCGAGATTGCCGCCACGTTCAATATCGACAACGCCAACCGCTTCCGCAAACAGGAGCTGATTTTTGCCATCCTGAAAGCCGTGGCCAAGCGCGGCGATTCGATTTTTGGCGACGGCGTACTGGAGGTACTGCCCGACGGGTTCGGATTTTTGCGGTCGCCGGAAACCTCGTATCTGGCCAACACCGACGACATCTACGTGTCGCCGTCGCAGATCCGCCGCTTCAACCTGCACACCGGCGACAAGATCGAAGGCGAGATCCGCACGCCAAAGGATGGTGAACGCTACTCGGCGATGACCAAGCTCGACAAGATCAACGGCGAGCCGCCGGAGGCGAGCAAGAACAAGATTCTGTTCGAAAACCTGACCCCGCTGCACCCGGACGAACCGCTCAAGCTGGAGCGCGACATCAAGGCCGAGGAAAACCTCACCAGCCGCGTCATCGACATCGTTGCACCGATCGGCAAGGGCCAGCGCGGCCTGCTGGTCGCGCCGCCGAAGTCGGGCAAAACCGTAATGCTGCAGCAGATCGCCCACGCGATCAGCTCCAACCATCCCGACGTCGTGCTGTTCGTGCTGCTGATCGACGAGCGCCCGGAAGAAGTCACTGAAATGAGCCGCACCGTGCGCGGCGAAGTCATCGCCTCCACCTTCGACGAACCCGCCAGCCGCCACGTACAGGTCGCCGAAATGGTGATCGAGCGCGCCAAGCGTCTGGTCGAGCACAAGAAGGACGTGGTGATTCTGCTCGACTCGATCACCCGCCTCGCACGCGCCTACAACACCGTGCAGCCGGCGTCCGGCAAGGTGCTCACCGGCGGCGTCGACGCCAACGCGCTGCAAAAGCCCAAGCGCTTTTTCGGCGCCGCGCGCAATATCGAGGAAGGCGGCAGTCTCACCATCATCGCCACCGCGCTGGTCGAAACCGGCAGCCGCATGGACGACGTGATTTACGAAGAGTTCAAGGGCACCGGCAACCTCGAAATTCACCTCGACCGCAAGATGTCCGAGCGTCGCCTTTACCCTGCGATCAACGTCAACCGCTCCGGCACCCGCCGCGAGGAACTGCTGATTCCGCCCGAGTTGCTGCAAAAAGTGTGGGTGCTGCGCAAGTTGCTTTACCCGATGGACGACATGGAAGCGATGGAGTTTCTCATCGACAAGATCCGCGCGGCCAAAAACAACGCCGACTTCTTCGACTCGATGCGGCGCGGCTGA
PROTEIN sequence
Length: 420
MYLSELKQKPITELLEIAATFNIDNANRFRKQELIFAILKAVAKRGDSIFGDGVLEVLPDGFGFLRSPETSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDKINGEPPEASKNKILFENLTPLHPDEPLKLERDIKAEENLTSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQQIAHAISSNHPDVVLFVLLIDERPEEVTEMSRTVRGEVIASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNLEIHLDRKMSERRLYPAINVNRSGTRREELLIPPELLQKVWVLRKLLYPMDDMEAMEFLIDKIRAAKNNADFFDSMRRG*