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FFSP_09242018_shore_0_2um_scaffold_2020_4

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(2617..3429)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 270.0
  • Bit_score: 432
  • Evalue 7.60e-119
Formamidopyrimidine-DNA glycosylase id=1308450 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 270.0
  • Bit_score: 475
  • Evalue 2.10e-131
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 270.0
  • Bit_score: 503
  • Evalue 1.00e-139

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCTGAATTACCCGAAGTCGAAACCACCCGTCTGGGGCTGCAACCCCGCCTGCAGGGCCGCACGCTGACGCGCATTGTCGTGCGCAACCCACGCCTGCGCTGGCCGGTGCCGGACGATCTCGAGGTCCGGTTAGCCGGACAGGTGCTGCATACGCTCACGCGGCGCGGCAAATATCTGCTGTTCGACTTTGGCGCCGCAACCCTGATCGTGCATCTGGGCATGTCGGGCAGCCTGCGCTTTGCCGAAGGCGACGAGCCCGCCGCGCTGCACGACCATGTCGACTGGCTGTTCGACGACGGCACCCTGCTGCGGCTGCGCGACCCGCGTCGCTTTGGCGCCGTGCTGTGTACCGAGGACGCAAACACGCACCCCTTGCTGGCACATCTGGGACCGGAGCCGCTCACGCCGGCATTCGATGCCGCCTATCTCTACGCGCAATGCCAGCGCCGCAGCGCCGCCATCAAGCAGGTCATCATGGATGCACAGACCGTGGTCGGCGTCGGCAACATTTACGCATCCGAATCGCTGTTTCATGCCGGCATTCGCCCCGCCACCGCCGCGCGGCGCCTGAGCCGCCCCGCCTGCGCGCGCCTGGTGGCGGCCATCAAGCAGGTACTCACGGCCGCCATTGCGGCGGGCGGCAGTTCCTTGCGTGATTACGTCCACAGCAGTGGAGAACTCGGCTATTTTCAGCTACAAACAAGAGTCTATGATCGAGCAGGGTTGCCATGCAAAACCTGTGCAACGGCAATCCGGCGTATTGTGCAGGGCCAGCGCGCCAGTTTCTATTGTCCGGTGTGCCAACGCTGA
PROTEIN sequence
Length: 271
MPELPEVETTRLGLQPRLQGRTLTRIVVRNPRLRWPVPDDLEVRLAGQVLHTLTRRGKYLLFDFGAATLIVHLGMSGSLRFAEGDEPAALHDHVDWLFDDGTLLRLRDPRRFGAVLCTEDANTHPLLAHLGPEPLTPAFDAAYLYAQCQRRSAAIKQVIMDAQTVVGVGNIYASESLFHAGIRPATAARRLSRPACARLVAAIKQVLTAAIAAGGSSLRDYVHSSGELGYFQLQTRVYDRAGLPCKTCATAIRRIVQGQRASFYCPVCQR*