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FFSP_09242018_shore_0_2um_scaffold_2524_2

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: 710..2023

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 431.0
  • Bit_score: 709
  • Evalue 3.10e-202
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD id=1321120 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 431.0
  • Bit_score: 741
  • Evalue 4.40e-211
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 437.0
  • Bit_score: 839
  • Evalue 1.30e-240

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGAGCAAACAAACCAGCAACCAGATCGTCGACATCCTTTCGCTCGACCACGAAGGCCACGGCATCGCACGCATCGATAGCAAAGTCACTTTCGTCGATGGCGCACTGGCCGGCGAGCAGGTAGAGATCAACGTCTACCGCCAGCATGCCAAATACAACTCGGCCAATGCTGTCGCCATCCTCAAACCCAGCGCGCAGCGCACCTCGCCGCGCTGCCAGTATTTTGGTCGCTGCGGCGGCTGCTCGATGCAGCATCTGGAACCCAGCGCCCAGGTTGCAGCCAAGCAGCGCGTGCTGGAAGACAACCTCGCACACATCGGCAAGGTCAAGCCGGAGATCATCCTGCCCGCGCTGCACGGCCCGAGCTGGAACTATCGCTCCCGCGCGCGGCTGTCGGCGCGACTGGTCGACAAGAAAGGCGGCGTACTGGTCGGCTTCCGCGAAAAGCGATCCAGTTATATCGTCGACATGACCAGCTGTGAAATCCTCACCCCCGATGTGTCAGCACTGTTGCAACCGCTGCGCGAACTCACCGTGCAGTTTTCCAACGCAGACCGCATCCCGCAAATCGAAATCGCGGTGGGCGAGCACATCACCGTGCTGGTGTTCCGCCTGCTCGCCCCCTGGAGCGACGACGACGCCGTCAAGGTGCGCGCCTTCGCCGAACTGCATGGCGTGCAGATATGGGAACAAAGCAAGGGCCCTGAAACCGTTCGCCCGTTCTGGCCCGAAACGGCACCCGAGCTCAGCTACAGCCTGCCCGAATTCGGTCTGGTCATGCCGTTCAAACCCATTGATTTCACCCAAGTCAATGTCGCCATCAACCGCGCGCTGGTGAGCCGCGCCATGCGCCTGCTGCAACCCAAAGCAGGCGAGCGCATCGCCGACCTGTTCTGCGGATTGGGCAACTTCACCCTGCCCATCGCCACCAGCGGCGCTGACGTGGTCGGCATCGAAGGCAGCCCGGAACTGGTAGCGCGCGCACGCGAAAATGCGCTGCACAACAAACTCTCGAACGCGCATTTCGCCGTCGACAACCTGTTTGAAATGACGCCGGAAAAATTCGCCTCGCTCGGCCATTTCGACAAGCTGCTGATCGACCCGCCGCGCTCAGGCGCCATCGACCTGATCCAGGCACTGCCGGACAGCGGCGCACCGCACCGCATCGTCTACGTCTCGTGCGACCCCGCCACGCTGGCGCGTGATGCCGAGGCGCTGTGCCACAGCAAAGGCTACCGGCTGGCTGCGGCCGGCGTCGCCAACATGTTCCCGCACACCGCGCATGTCGAATCGATCGCGTTGTTCGAGCGGTAA
PROTEIN sequence
Length: 438
MSKQTSNQIVDILSLDHEGHGIARIDSKVTFVDGALAGEQVEINVYRQHAKYNSANAVAILKPSAQRTSPRCQYFGRCGGCSMQHLEPSAQVAAKQRVLEDNLAHIGKVKPEIILPALHGPSWNYRSRARLSARLVDKKGGVLVGFREKRSSYIVDMTSCEILTPDVSALLQPLRELTVQFSNADRIPQIEIAVGEHITVLVFRLLAPWSDDDAVKVRAFAELHGVQIWEQSKGPETVRPFWPETAPELSYSLPEFGLVMPFKPIDFTQVNVAINRALVSRAMRLLQPKAGERIADLFCGLGNFTLPIATSGADVVGIEGSPELVARARENALHNKLSNAHFAVDNLFEMTPEKFASLGHFDKLLIDPPRSGAIDLIQALPDSGAPHRIVYVSCDPATLARDAEALCHSKGYRLAAAGVANMFPHTAHVESIALFER*