ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_4802_2

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: 1194..2159

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=12493112 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 322.0
  • Bit_score: 582
  • Evalue 1.90e-163
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 322.0
  • Bit_score: 579
  • Evalue 4.60e-163
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 321.0
  • Bit_score: 624
  • Evalue 4.70e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAAAAATAATGACTTAGAGAAAGATTCTGTCCGCCGCGTCAAGATTGACGACAGCGCAGACGGCCAGCGGCTGGACAACTTCCTGATGGCCAAACTGAAAGGCGTGCCGAAAAGCCGCATTTACAAGATCGTTCGCGGGGGCGAGGTGCGTATCAATGGCGGTCGCGTCGATGTCAGCTATCGCCTGCAACTGGGCGACGAAGTGCGCATCCCGCCGGTACGCGTTGCCGCGCCGGTGATCACGCCGGCAACGCATTTGCCTCAGGGCGGCATCCGGCTGGTGCCCCGCATCCTGTATCGCGATGATGCCTTGATTGCATTGAATAAACCTGCCGGCATGGCGGTGCATGGCGGCAGTGGCATTTCGCGCGGCGTGATAGAGCAGATGCGCCTGGAACTGCCTGAATGCCGTTACATGGAACTGGTTCACCGGCTCGACCGGGAAACCTCGGGCGTGTTGCTGATCGCCCTGAAGCGGCGTGCGCTGGTCGGGTTGCACGCCGCGATGCGTGATGGTCAGATCGAAAAACGCTACCTGACGCTGGTGGCCGGGCGCTGGCCGAATCCTCTGCAGCATGTGAGGCTGCCACTGCATAAAAGAGTCACCGACGACGGCGAGAAACGCGTCACCGTGCGCGATGACGGCCAGACAGCGCACACGATTTTCCGCCGCCTGGAGTCGTTTGCCGATTTCACCCTGCTGGAAGCGGAACTTAAAACCGGTCGCACCCACCAGATCCGCGTGCATACCTCGCACCTGGGGTTCCCGATTGCGGGCGATGATAAATATGGCGACTTCGAGTTGAATAAAACGTTGGCCAAACAGGGTCTCAAGCGGATGTTTTTGCACGCTGCCAAGCTGTCGTTCGCCCATCCGGTGACGGGTGAGCGTTTGTTGATCGAGGCACCCTTGCCTGCAGATCTTTCACCTTTTCTGGATTCGCTTCATGCCCAAGCACTTTGA
PROTEIN sequence
Length: 322
MKNNDLEKDSVRRVKIDDSADGQRLDNFLMAKLKGVPKSRIYKIVRGGEVRINGGRVDVSYRLQLGDEVRIPPVRVAAPVITPATHLPQGGIRLVPRILYRDDALIALNKPAGMAVHGGSGISRGVIEQMRLELPECRYMELVHRLDRETSGVLLIALKRRALVGLHAAMRDGQIEKRYLTLVAGRWPNPLQHVRLPLHKRVTDDGEKRVTVRDDGQTAHTIFRRLESFADFTLLEAELKTGRTHQIRVHTSHLGFPIAGDDKYGDFELNKTLAKQGLKRMFLHAAKLSFAHPVTGERLLIEAPLPADLSPFLDSLHAQAL*