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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_1499
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 6204 bp 63.93 9.79 98.69
FFSP_09242018_shore_0_2um_scaffold_2483
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 3902 bp 61.81 8.96 96.18
FFSP_09242018_shore_0_2um_scaffold_2739
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3589 bp 63.25 8.57 96.21
FFSP_09242018_shore_0_2um_scaffold_1515
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 6115 bp 63.03 11.06 88.55
FFSP_09242018_shore_0_2um_scaffold_4709
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 2288 bp 60.45 10.03 89.82
FFSP_09242018_shore_0_2um_scaffold_2508
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3873 bp 62.56 9.33 91.40
FFSP_09242018_shore_0_2um_scaffold_2765
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 3555 bp 65.37 7.34 89.54
FFSP_09242018_shore_0_2um_scaffold_1795
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 5183 bp 59.06 7.47 87.59
FFSP_09242018_shore_0_2um_scaffold_2524
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 3848 bp 60.27 9.47 91.92
FFSP_09242018_shore_0_2um_scaffold_1299
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 7114 bp 64.49 8.81 91.47
FFSP_09242018_shore_0_2um_scaffold_2023
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 4682 bp 62.58 9.84 97.91
FFSP_09242018_shore_0_2um_scaffold_2281
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 4234 bp 64.97 8.25 97.28
FFSP_09242018_shore_0_2um_scaffold_3267
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 3088 bp 66.35 7.24 97.93
FFSP_09242018_shore_0_2um_scaffold_1828
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 5099 bp 65.13 9.97 87.96
FFSP_09242018_shore_0_2um_scaffold_1322
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 6943 bp 58.07 9.96 62.57
FFSP_09242018_shore_0_2um_scaffold_1838
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 5078 bp 60.99 11.25 91.61
FFSP_09242018_shore_0_2um_scaffold_1840
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 5077 bp 62.73 6.82 93.24
FFSP_09242018_shore_0_2um_scaffold_4005
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 2619 bp 58.65 9.16 99.20
FFSP_09242018_shore_0_2um_scaffold_3798
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2735 bp 62.56 9.05 92.58
FFSP_09242018_shore_0_2um_scaffold_1847
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 5065 bp 62.86 10.01 77.00
FFSP_09242018_shore_0_2um_scaffold_3034
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3287 bp 58.35 13.01 86.98
FFSP_09242018_shore_0_2um_scaffold_1341
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 6819 bp 62.77 7.55 86.05
FFSP_09242018_shore_0_2um_scaffold_3042
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3272 bp 63.81 7.47 96.36
FFSP_09242018_shore_0_2um_scaffold_2327
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 4142 bp 63.18 8.15 96.40
FFSP_09242018_shore_0_2um_scaffold_2854
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3468 bp 65.43 10.12 98.10
FFSP_09242018_shore_0_2um_scaffold_2089
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 4559 bp 66.57 9.31 100.22
FFSP_09242018_shore_0_2um_scaffold_2601
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3750 bp 61.84 9.08 96.72
FFSP_09242018_shore_0_2um_scaffold_1883
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 4955 bp 63.19 11.65 83.61
FFSP_09242018_shore_0_2um_scaffold_9463
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2352 bp 63.01 9.63 86.73
FFSP_09242018_shore_0_2um_scaffold_2092
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 4557 bp 67.52 9.87 98.42
FFSP_09242018_shore_0_2um_scaffold_2862
Order: Hydrogenophilales (80%)
5 4147 bp 64.14 9.91 98.67
FFSP_09242018_shore_0_2um_scaffold_3586
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2863 bp 66.19 7.44 100.59
FFSP_09242018_shore_0_2um_scaffold_2867
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3447 bp 63.48 8.53 96.43
FFSP_09242018_shore_0_2um_scaffold_4308
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 2467 bp 62.75 7.36 95.46
FFSP_09242018_shore_0_2um_scaffold_2360
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 4098 bp 58.32 13.47 89.68
FFSP_09242018_shore_0_2um_scaffold_4313
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2463 bp 62.20 7.37 98.17
FFSP_09242018_shore_0_2um_scaffold_3343
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3024 bp 59.42 8.09 94.05
FFSP_09242018_shore_0_2um_scaffold_3351
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3018 bp 63.75 9.15 87.28
FFSP_09242018_shore_0_2um_scaffold_1656
Order: Hydrogenophilales (60%)
5 5613 bp 62.34 9.75 95.14
FFSP_09242018_shore_0_2um_scaffold_2634
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3708 bp 57.79 10.07 95.95
FFSP_09242018_shore_0_2um_scaffold_2643
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3699 bp 55.72 9.98 80.99
FFSP_09242018_shore_0_2um_scaffold_1667
Order: Hydrogenophilales (80%)
5 5575 bp 61.38 8.23 87.61
FFSP_09242018_shore_0_2um_scaffold_2645
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3692 bp 49.84 7.19 93.61
FFSP_09242018_shore_0_2um_scaffold_2655
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3681 bp 63.60 8.52 95.60
FFSP_09242018_shore_0_2um_scaffold_1945
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 4813 bp 61.65 10.63 85.83
FFSP_09242018_shore_0_2um_scaffold_3386
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 2997 bp 64.63 8.61 90.59
FFSP_09242018_shore_0_2um_scaffold_3644
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2835 bp 61.55 9.42 85.29
FFSP_09242018_shore_0_2um_scaffold_2668
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 3672 bp 57.11 11.89 91.67
FFSP_09242018_shore_0_2um_scaffold_2929
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3388 bp 61.39 8.72 93.95
FFSP_09242018_shore_0_2um_scaffold_2938
Order: Hydrogenophilales (100%)
5 3376 bp 61.37 13.11 96.77
Displaying items 151-200 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.