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OR_08142018_10m_0_1um_scaffold_12295_1

Organism: OR_08142018_10m_0_1um_Hydrogenophilales_64_151

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3..1736

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12493505 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 578.0
  • Bit_score: 1085
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 578.0
  • Bit_score: 1062
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 578.0
  • Bit_score: 1062
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
GCGCAATACGGCGTCGGCCAGTACCTCGGCCTGATCAACATGGATCTCGGCGACGGCGCCACCGAGTTCCTCCAGCTCGAATACGCCCGTGGCGACAAGCTTTACGTGCCGGTCGCCAACCTGCACCTGATCTCGCGATATTCCGGCGCCGGCGAGGGTGCGGCGCCTTTACATAAATTAGGCACCGACCAGTGGGAGAAAGCGCGCCGCCGCGCCATGCAGGCGGCGCGCGACACCGCCGCCGAGCTGCTGAACCTGTACGCGCTGCGCGCGGCGCGCGAGGGCCATGCCTTCAAGTTTTCAATGCACGATTACGAGGCCTTCGCCGAGGGCTTCGGCTACGAGGAAACGCCGGACCAGGCCGCCGCGATCACGGCTGTCATGGCCGACATGCAGTCGGGCAAGCCGATGGACCGGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCGTTGCGCGCTGCCTTCATGGCGGTGATGGGCGGCTACCAGGTGGCGGTGCTGGTGCCGACCACGCTGCTGGCCGAGCAGCACTTCAACAATTTCTCCGACCGCTTCTCGGCCTGGCCGGTGAAGCTGGCCGAACTGTCGCGCTTTCGCAGCCCGAAGGAGCAGGCCGAGGCGCTCAAGGCGCTGGCGGACGGCAAGCTCGACATCGTCATCGGCACCCACCGGCTGATCCAGAAGGACGTCAAATTCGCCCGCCTGGGGCTGGTGATCCTGGACGAAGAGCACCGCTTCGGCGTGCGCCAGAAGGAGCAGCTGAAGGCCTTGCGCGCCGAGGTGGATGTGCTGACGCTGACCGCCACGCCGATCCCGCGCACGCTGGCGATGTCGCTCGAAGGCATCCGCGATTTCTCGGTGATCGCCACCGCGCCGCAGAAGCGGCTGGCGATCAAGACCTTCGTCCAGCCGTTCTCCACCGGGCTGATCCGCGAGGCCGTGCTGCGCGAACTCAAGCGCGGCGGCCAGGTATATTTCCTGCATAACGAAGTCAGCACCATCCAGAACATGCACGAACGGCTGGAAAAGCTGCTGCCGGAAGCCCGCATCCGCGTCGGCCACGGCCAGATGGGCGAACGTGAACTCGAACAGGTAATCCGCGACTTTTACCAGCAGCGCTACGACATCCTGTTGTGCACCACCATCATCGAGACCGGCATCGACATCCCGACTGCCAACACCATCCTGATCAACCGCGCCGACAAGTTCGGCCTCGCCCAATTGCACCAGTTGAGGGGCCGCGTCGGGCGCTCGCACCACCAGGCCTTCGCCTACCTGCTGCTGGACGAGGACCGCACGCTGACGCCGCAGGCGAAGAAACGCCTGGAAGCGATCCAGTTGATGGAGGAGCTGGGTGCCGGCTTCCATCTCGCCATGCAGGACCTGGAAATCCGCGGCGCCGGCGAGGTACTGGGCGAGAAGCAGAGCGGGGAAATCCTCGAAGTCGGCTTCTCGCTCTACAACGACATGCTGTCCACTGCGGTGGCAAGCCTGAAGGCCGGCAAGGAACCGGACATGAACCAACCGCTCGGGGTGGTGTCCGAGATCAACCTGCACCTGCCCGCGCTGCTGCCGGTGGATTACTGTCCCGACGTGCACGAGCGGCTGGTGCTGTACAAGCGGCTGGCGAGTTGCCAGACCCCGGACGAGCTGACGCAGATGCAGGAGGAACTGGTCGATCGTTTTGGCGAGCTGCCCGATACGGCGCGCGCCCTGCTGGCGGTG
PROTEIN sequence
Length: 578
AQYGVGQYLGLINMDLGDGATEFLQLEYARGDKLYVPVANLHLISRYSGAGEGAAPLHKLGTDQWEKARRRAMQAARDTAAELLNLYALRAAREGHAFKFSMHDYEAFAEGFGYEETPDQAAAITAVMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNNFSDRFSAWPVKLAELSRFRSPKEQAEALKALADGKLDIVIGTHRLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAIKTFVQPFSTGLIREAVLRELKRGGQVYFLHNEVSTIQNMHERLEKLLPEARIRVGHGQMGERELEQVIRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLLDEDRTLTPQAKKRLEAIQLMEELGAGFHLAMQDLEIRGAGEVLGEKQSGEILEVGFSLYNDMLSTAVASLKAGKEPDMNQPLGVVSEINLHLPALLPVDYCPDVHERLVLYKRLASCQTPDELTQMQEELVDRFGELPDTARALLAV