ggKbase home page

OR_08142018_10m_0_1um_scaffold_6

Search features with annotation key words

Displaying items 31-60 of 227 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_6_31
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

37042..38904
DNA (1863bp) protein (621aa)
Glutathione-regulated potassium-efflux system protein KefC n=1 Tax=Smithella sp. ME-1 RepID=V4FBC0_9DELT
kefB; potassium efflux system protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_32
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(38901..39971)
DNA (1071bp) protein (357aa)
Oxidoreductase domain protein id=4527372 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
oxidoreductase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_33
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(39958..40788)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364480E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_34
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

40872..41840
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAV8_FLAJ1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_35
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

41845..42618
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BA740
MazG family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_36
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

42623..46366
DNA (3744bp) protein (1248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375CF62
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_37
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(46363..48039)
DNA (1677bp) protein (559aa)
PHP domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T913_NIAKG
PHP domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_38
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(48142..48378)
DNA (237bp) protein (79aa)
DNA-binding protein HU, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDQ9_9GAMM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_39
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(48453..48719)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Segetibacter koreensis RepID=UPI0003636766
50S ribosomal protein L27
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_40
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(48768..49073)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362D1FD
50S ribosomal protein L21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_41
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

49289..50728
DNA (1440bp) protein (480aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_42
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

50785..51942
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Segetibacter koreensis RepID=UPI000367CA70
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_43
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

51978..53324
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376960C
peptidase M50
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_44
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

53885..54343
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003745C7F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_45
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(54366..55358)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPE6_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_46
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(55486..56505)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D88E4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_47
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(56586..57953)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A75BF
ammonium transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_48
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

58265..61534
DNA (3270bp) protein (1090aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F3435
beta-galactosidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_49
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

61592..62092
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDZ1_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_50
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(62089..62439)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003638454
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_51
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(62439..63002)
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_52
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

63074..63856
DNA (783bp) protein (261aa)
NLP/P60 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P0_NIAKG
NLP/P60 protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_53
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(63864..64016)
DNA (153bp) protein (51aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_54
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(64064..64489)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26BZ0_FLABB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_55
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(64491..65042)
DNA (552bp) protein (184aa)
Inorganic pyrophosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N8_NIAKG
inorganic pyrophosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_56
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65061..65459)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361F330
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_57
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65503..66222)
DNA (720bp) protein (240aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS46_CHIPD
methyltransferase small
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_58
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(66233..68425)
DNA (2193bp) protein (731aa)
protease n=1 Tax=Pedobacter agri RepID=UPI00029AEB56
oligopeptidase B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_59
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

68476..69285
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003617445
PAS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_6_60
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(69373..70122)
DNA (750bp) protein (250aa)
succinate dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036B7B2B
succinate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 31-60 of 227 in total

View Taxonomy