ggKbase home page

OR_08142018_10m_0_1um_scaffold_1_17

Organism: OR_08142018_10m_0_1um_Sphingobacteria_36_75

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(15700..17004)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHA9_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 433.0
  • Bit_score: 412
  • Evalue 4.60e-112
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 433.0
  • Bit_score: 412
  • Evalue 1.30e-112
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 434.0
  • Bit_score: 811
  • Evalue 3.70e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1305
ATGCGTAAGTTAATTCTGCTTGTTTTTTTAGGAACTGTTTCGGCTCAGTTTGGATACAGTCAAAATAGACTGAGTTTGTCTGATGCTTTGGCTATTGCTCTAAAGAATAGCTATAATATTCAACTGGCTAAAAACAATGTTGAAATAGCGACAATTAATAATTATGTTGGGGTTGCTGGTGGATTACCCACTGTTAATGCTACCGTTAACGATGTAGAAAATATTACTACGATTAATCAAAAATTTCCAGACCCTTCTAGAGATGTAACCAGAAGTGGTGTTTCATCAAATAATATGAATGCCAATATTACTGCAGGTATTTTATTATTTAATGGATTTAGGGTTAAGGCAGCACAGCAAAGATTAAATGAATTACAAAAAATGAACCAAGACATGCTGAATGCACAAATTCAGAGTACCATGGCTTCGGTAATTACCAGTTATTATGATGTAGTACGTCAACAGAATTTACTCAGTACCATTGATAAATCTATTGAAGTTTCTCAACAAAGAATTGATATCATCAATAGTAGGAAAGAAGTAGGTCTTGCCAATAATGCAGATTTATACCAAGCTCAAATTGATTTGAATGCATTGGTTCAATCTAAACAAGCGCAACAATTAATTATAGATCAGGGGAAAACCAATTTGTTGAGTTTAATTTTTGTAAGCCCAGATTCAAGTGTAGTCATTAGTGATACCATTGTAGTAGATGAAAAAATTAATTTCAGCCAGTTGAAAACACTGGCTTTAAAGAATCCACAAGTTTCAGCAGCAGAGCAGCAAATAAAAATTAATGAGTTAATTGAAAGAGAAACTGCTGCACTCCGCGTTCCTACTTTACGTGCTACAACTGGTATTAACTTTAGCAATACCAAAAGTGGCGCAGGATTTATTCTTGAAAATAGAAGCTATGGTCCATTCTTGGGTGTCAATTTAGCTATTCCTATTTACAATGGATTAATCAATAAAAAACAACAACAGGTTGCAGAAATTAATACGCGCAATGCTAAAGTACAACGCGATCAATTCTTATTAGATATTGAAACTGGTGCAGTAAGAACTTATCAAGCTTATGCAAATACCTTGGCGCAATTAAAAACCGCCAAACAAAATCAAGTATTAAGTAAGCAGTTATTAGATTTAGTGATGCAACGTTTTCAATTGGGTCAAGCTACTATTGTTGATGTAAAACTAGCCCAGCAAAGTTTTGAAAATGAATCGTATAGATTGGTTAACTTGGCATTTACAGCCAAAGTTGCCGAAGTTGAATTAAAGCGCTTGGCCAATATTATTGAGCCTTAA
PROTEIN sequence
Length: 435
MRKLILLVFLGTVSAQFGYSQNRLSLSDALAIALKNSYNIQLAKNNVEIATINNYVGVAGGLPTVNATVNDVENITTINQKFPDPSRDVTRSGVSSNNMNANITAGILLFNGFRVKAAQQRLNELQKMNQDMLNAQIQSTMASVITSYYDVVRQQNLLSTIDKSIEVSQQRIDIINSRKEVGLANNADLYQAQIDLNALVQSKQAQQLIIDQGKTNLLSLIFVSPDSSVVISDTIVVDEKINFSQLKTLALKNPQVSAAEQQIKINELIERETAALRVPTLRATTGINFSNTKSGAGFILENRSYGPFLGVNLAIPIYNGLINKKQQQVAEINTRNAKVQRDQFLLDIETGAVRTYQAYANTLAQLKTAKQNQVLSKQLLDLVMQRFQLGQATIVDVKLAQQSFENESYRLVNLAFTAKVAEVELKRLANIIEP*