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OR_08142018_10m_0_1um_scaffold_1_62

Organism: OR_08142018_10m_0_1um_Sphingobacteria_36_75

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(60962..61540)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 186.0
  • Bit_score: 148
  • Evalue 4.20e-33
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 186.0
  • Bit_score: 148
  • Evalue 1.20e-33
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV96735.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 186.0
  • Bit_score: 148
  • Evalue 5.90e-33

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
TTGAGTTTATCTGATGAGCAAATTAAGCACATAATTGATGGCTGTCGAAAGAATAATCGCCAAAGCCAAAGGGCTCTTTATGAGTGGTTGCAAGGGTATGCTAATTCTGTTTGTAAAAGGTATGCGAATGAGGTAAACTTAATAGAGGATTTGGTCATGGATGGGTTCATGAAAATATTTAAAAATATAGCACAATACGATATGAGTAATTATGCTGTTTCAGAAGCAGCATTTAAAGGCTGGTCTAAAAGAGTCTTTATTAATAACTGTATTAACTATTCTAAAAAATATTTTTCTGATGCTATTTCCATAGAAGAGTTAACTGAACAGCAACAATATGAACCAGCAATTAATGAAGAAATCATTCAGACATTGGGCTACCAAGAAATCATCCAATTGGTCATGAGTTTACCCATGAGCTATAAAACGGTTTTTTGTTTGCATATTATTGATGGCTATAGCCATCAGGAAATTGCTAATTTATTGGGTATTAATGAGGGTACTTCTAAATCTAATTTGTTTAAAGCCAAGCGACACTTACAATTATTATTGTCATCCAAAAGCAAATTGAATGGATAA
PROTEIN sequence
Length: 193
LSLSDEQIKHIIDGCRKNNRQSQRALYEWLQGYANSVCKRYANEVNLIEDLVMDGFMKIFKNIAQYDMSNYAVSEAAFKGWSKRVFINNCINYSKKYFSDAISIEELTEQQQYEPAINEEIIQTLGYQEIIQLVMSLPMSYKTVFCLHIIDGYSHQEIANLLGINEGTSKSNLFKAKRHLQLLLSSKSKLNG*