ggKbase home page

OR_08142018_10m_0_1um_scaffold_1_195

Organism: OR_08142018_10m_0_1um_Sphingobacteria_36_75

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 221911..223650

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ1_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 587.0
  • Bit_score: 768
  • Evalue 4.50e-219
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 587.0
  • Bit_score: 768
  • Evalue 1.30e-219
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 579.0
  • Bit_score: 1122
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1740
ATGTATGACATTCTTCAGTTAAATGACATGCTACTACCAGAGTTACTGGATATAGCTGAACGTTTAAAAATTAGTGGTGCAAAAAAACAAGACAAACAAGGTTTGATTTACAAGATTCTTGATTCTCAAGCTGTACAAGAAAGTACCGCGAAAGAAAATGGTGCACCTAAAAAAGCGGGTCGTCCTAAGAAGGCCGTTAATTTTAAAACATCTACTGGTTCTACAGAAGAAGCAGAGGTAATGCAAGAAGCGCCAGCCGCTCCAATTGCTAAAACTGCAAAAGCTGCGCCAACACCTGTGCCTGTAGCGGCTTCTAATCCCCCTGAAATAAAAAACACGGAACCAGCAGGACCTAGCAGACCCATCAAAAAAGCCATGCCACCTAAAAAGGGACCGGTTGGGCCTGGGCCAAGACCTAGATTAGAAAAACCTACTGAATCTGATGACACTAATAAGAACGATCAGGTAGAAAATGACCCAACAGCCAATATAGCTGCAGCCATTATTCAAACTTTGGAAGCCAGCGATAATAATGGGGAAGCGGCACAAGCTCCTGAAACTACTTTACAACAAGAGCGTCCTAGACACCAGCCCGTTAAAAAAGAACCTGTTTTCAATATTGAATTTGAAGGCGTAATTCCTGGTGAAGGGGTTTTAGAAATGATGCCCGATGGATATGGTTTCTTACGCTCCTCTGATTATAACTATTTATCTTCTCCGGATGACGTATATGTATCTCCTTCTCAAATCAAATTATTTGGTTTAAAAACAGGTGATACCGTAACTGGTTCTGTACGTCCTCCTAAAGAAGGTGAAAAATATTTTGCCCTATTAAAAGTCGATTTCATCAATGGTAAGCGCCCCGACGAAGTGCGTGATCGTGTACCATTTGATTACTTAACTCCCCTGTTTCCTTTTCAGAAACTGAATTTATTTACTTCGCCTAGTAATTATAGCACACGCATTATTGATTTATTTACTCCAATAGGTAAAGGTCAGCGTGGATTGATTGTAGCTCAACCAAAAGTGGGTAAAACCATGTTGTTGAAAGAAGTGGCCAATGCCATTGCTGCCAATCACCCCGAATGCTATTTAATGGTGGTGTTAATTGACGAACGTCCTGAGGAAGTAACCGATATGGAGCGCAGCGTAAATGCAGAAGTAATTGCTTCCACATTTGATGAACCCGCTGAGAAGCACGTAAAAGTCTCTGCTATTGCTCTACAAAAAGCCAAGCGTTTAGTAGAGTGTGGTCACGATGTAGTGATTTTATTAGACTCGATCACCCGTTTGGCTAGAGCCCATAATACCGTTGCCCCTTCAAGTGGTAAAGTATTAAGTGGGGGAGTGGAAGCTAACGCACTACTAAAACCCAAACAGTTTTTTGGAGCAGCTCGTAAAATTGAGAATGGTGGATCATTAACCATTTTAGCAACTGCTTTGGTAGAAACTGGTAGTAAAATGGACGAAGTAATTTTTGAAGAATTCAAGGGTACGGGTAATATGGAATTGCAGTTGGAAAGAAAATTAGCCAACAAACGTATTTTCCCAGCCATTGATTTAGTGGGATCTTCTACTCGTAGAGACGATTTATTATTAGATAAAGATGTACTACAAAGAATGAATATTCTTCGTGTATTCTTAAATGATATGAATCCCGAAGAGGCCATGAATGAATTACTCAAGCGTATGCGCGGAACAAAAAGCAACGAAGAGTTTTTGGCCAGCATGAATAGATAG
PROTEIN sequence
Length: 580
MYDILQLNDMLLPELLDIAERLKISGAKKQDKQGLIYKILDSQAVQESTAKENGAPKKAGRPKKAVNFKTSTGSTEEAEVMQEAPAAPIAKTAKAAPTPVPVAASNPPEIKNTEPAGPSRPIKKAMPPKKGPVGPGPRPRLEKPTESDDTNKNDQVENDPTANIAAAIIQTLEASDNNGEAAQAPETTLQQERPRHQPVKKEPVFNIEFEGVIPGEGVLEMMPDGYGFLRSSDYNYLSSPDDVYVSPSQIKLFGLKTGDTVTGSVRPPKEGEKYFALLKVDFINGKRPDEVRDRVPFDYLTPLFPFQKLNLFTSPSNYSTRIIDLFTPIGKGQRGLIVAQPKVGKTMLLKEVANAIAANHPECYLMVVLIDERPEEVTDMERSVNAEVIASTFDEPAEKHVKVSAIALQKAKRLVECGHDVVILLDSITRLARAHNTVAPSSGKVLSGGVEANALLKPKQFFGAARKIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELQLERKLANKRIFPAIDLVGSSTRRDDLLLDKDVLQRMNILRVFLNDMNPEEAMNELLKRMRGTKSNEEFLASMNR*