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OR_08142018_10m_0_1um_scaffold_417_2

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 367..1899

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Cronobacter sakazakii 701 RepID=K8CTH9_CROSK similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 521.0
  • Bit_score: 432
  • Evalue 3.90e-118
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 524.0
  • Bit_score: 449
  • Evalue 3.30e-123
sigma 70 (RpoD) similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 516.0
  • Bit_score: 448
  • Evalue 1.50e-123

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Taxonomy

Halomonas anticariensis → Halomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGGCATCATACGATGAACAACAGCAATTAGCGGATTTAATCGCGCGTGGACGTGAACAAGGATATCTTAATTACCAAGATATCACGGACATGTTGAATGATGAGTTCGAAGATGAAGAAAAGATTGAAGAGATCGTTGTTCTGTTAGGCGACATGGGCATTAATGTCCTCGATGATGCTTTGCCTAATCCTGATATTTTGGTGCCTGGTGCGCTCGTTGATGCTGACCCTGAAGTGGCTGCTGCCAGCATTGCCGATGATGGCGAATTAGGTCGTACTTCCGATCCTGTGCGTATGTATATGCGTGAAATGGGTTCTGTGGAGCTCCTAACTCGTAAGGGTGAAATTGAAATCGCACGTCGTATCGAGTCAGGTACGCGTGACATGCTCACTTCTTTAGCGCTTTACCCACAAATGCCGACCTTGCTCTTTCAACACTTGAAACAAGTGGAAGAGGGGGAGATTAAGCTTAGCGATTTGGTGATGGGTTTCTTGATGCCTGAACAAGAAGAAGCATCGCCAGCGCCTGAAGTTGCTGTTGCAGATGAGAGTTTAGAAGCGGATGATGATTCGGCTGATGGTGTTTCTAAAGAAGACCCTTACGATACCGAAGGTGTTACGGCTTTCTTAGCAGAGTTGCGTGACTTGCACCAAGTTGCTAGTAGTCACGAAGCAGAGTTTGGACATGCGGATGAGCGTGCGAAAACAGCGCGTTTGGCTGTTGCCAGCCGTTTGATGACGGTTAAGTTAGCTCCTTCATTTGTTGCCGAAGTGTTAGCTGATTTACGTAAACACGTCGATCAAATTCGTCAGTATGAACGCTTAATTATGGATTTAACGGTTGAGCAAGGCCGTTTACCGAAACAACATTTTATCAGTACCTTTGTTGGTTCAGAAACCGATTTGGAGTGGATTGAGCGTGTTATTGCCGCTAATGTGGATGATTCAGCCGCTCGCTTACAAGGTTTGAAAGATCAGGTGACGCGTGCACAGAAACGCTTACGTTTCCTTGAAAAACGCATCGCTATGGATATTACCTCGCTGAAAGACGTGAATCGTAAAGTGGTCGATGCTGACAGTCGTACACGTGCCGCGAAAAAAGAGATGATCGAAGCTAACTTGCGTTTGGTGATTTCGATCGCGAAAAAATACACTAACCGTGGTTTGCAGTTCCTAGATTTGATTCAGGAAGGCAATATCGGTTTGATGAAAGCGGTGGATAAGTTTGAATATCGTCGCGGCTATAAGTTCTCTACCTATGCGACTTGGTGGATTCGTCAAGCCATTACGCGCAGTATTGCCGATCAAGCACGCACCATTCGTATTCCAGTACACATGATTGAAACCATTAATAAGCTAAATCGTGTACAGCGTCAGTTACTCCAGCAGATGGGGAATACCGACCATACTTTAGAGGAAGTGGGTAAGCAGTTCGATGTAACGCGTGAGCGAATTCGTCAGATTGAAGCCAAAGCACTTCGTAAATTGCGTCATCCATCGCGTGCAGAAAAACTGCGCTCTTTCTTGGATTGA
PROTEIN sequence
Length: 511
MASYDEQQQLADLIARGREQGYLNYQDITDMLNDEFEDEEKIEEIVVLLGDMGINVLDDALPNPDILVPGALVDADPEVAAASIADDGELGRTSDPVRMYMREMGSVELLTRKGEIEIARRIESGTRDMLTSLALYPQMPTLLFQHLKQVEEGEIKLSDLVMGFLMPEQEEASPAPEVAVADESLEADDDSADGVSKEDPYDTEGVTAFLAELRDLHQVASSHEAEFGHADERAKTARLAVASRLMTVKLAPSFVAEVLADLRKHVDQIRQYERLIMDLTVEQGRLPKQHFISTFVGSETDLEWIERVIAANVDDSAARLQGLKDQVTRAQKRLRFLEKRIAMDITSLKDVNRKVVDADSRTRAAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVQRQLLQQMGNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRAEKLRSFLD*