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OR_08142018_10m_0_1um_scaffold_2205_6

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(3057..4616)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037453A8 similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 526.0
  • Bit_score: 498
  • Evalue 7.70e-138
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 529.0
  • Bit_score: 479
  • Evalue 6.10e-133
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 529.0
  • Bit_score: 479
  • Evalue 3.00e-132

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Taxonomy

Thioalkalimicrobium cyclicum → Thioalkalimicrobium → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGCCATGTTGCCAGGATTACAGTTTAACGTCAGCCAACAGCTCAAGCTCACGCCACAACTGCAACAATCAATTAAGATTTTGCAGCACTCAGCTATTGAACTTCAAGAAGCAATTAGCGAAGCCTTAGACAGTAATATCATGCTCGAACTGGAAATGGACGATGCTACCGCCTCATCCCCTAACGAATCAACTGAATTAACAAGCTTTGACGATGTTGATGCGGATACGGAATTTGGCACATTAAGTGAATTTAATAGTGTAAGCGACGATCACTCTATAGACCACCTCAATCATCTAACTGACAATCTGGATTGTCAGTGGGATGACCTGTTCGACAAAGATGGCAATGAAGCACCTGTTCAACAGAGTGAATTTGAAGATTTTTCGGTTACCTCTCATCACGAAAATGATGACTATACCCCAGCAGAAAGCTATACCGCTGCGCATGAAGACCTATACAGTCATCTCAAATGGCAAGTCGATACTTTCACTTGGGGAACGGATATTCAACAAGCCATTGCCTACTATCTCATTGACTTAATTGACGAACAAGGCTATTTGAGTAGCAATTTAGATCAAGTGATTGAAGCCATCAAAGAGAATGAAGTCTTTACGCCCAACGAAGATGATATTGAAACCGTATTAACATTGATTCAAGATAACTTTGAGCCAGCTGGTGTCGGTGCTCGCTCTATCCAAGAATGTTTACTGATTCAACTCAAAGGCATGCTGCCACAGACTGCATTGATTGATACCGCAATTCGCATGCTCAGCGAACGCTTTGACTGGTTTGCACACGGTGATTTTACGCGACTAAAACGTGTTTATGGACTTGATGAGACGAGCTGGATTGCATTGATGGGTCTTATCCAATCTCTCAACCCTAAACCAGGTTTGAGCTTTGCGGACAGTGAACGAGAGGTTATTATTCCCGACCTCATCATCAAACGAGATAAAAAAGGTTGGAAGGTTGAACTGAATCCCAATGCTTACCCACGCGTTCGCGTAAACAACGAATATGTAGACTTGCTCAAACACCTAGACAAATCGAGTCGCAGCCAAGAACAAGCCGAAGCAATGAAAGAAAAACTGTTAGAGGCACGAGGACTCATTAAAAGCATTCAAAGTCGTGGGGAAACACTACTCAAGGTAGGAGCTTACCTCGTCGCTGAACAAGCTAAATTCTTAGATGAAGGCGATGTTGCCATGAAGCCTTTGGTACTTCGCGATGTAGCCGATGCACTCGGTCTGCATGAATCGACAATTTCACGCGCCACCACACAAAAGTACATGCAAACACCACGAGGCACTTATGAGCTCAAATACTTTTTCTCTAGTAGTGTGAGTCAATACGGTCCGCAAGATCAATCAGCCGTCGCAATCAAAGCACGCATTAAACAGTTAATTGATGCCGAGGATCCTAAAAAGCCCATCAGTGATCAAGATTTAGTCGACAAACTGGAAACCATGAAAATCAGTGTTGCCCGAAGAACGGTAGCCAAATACAGAGAAGCCATGGGAATTCCATCCTCATCACAACGTAAAGTCAGACGCTAA
PROTEIN sequence
Length: 520
MAMLPGLQFNVSQQLKLTPQLQQSIKILQHSAIELQEAISEALDSNIMLELEMDDATASSPNESTELTSFDDVDADTEFGTLSEFNSVSDDHSIDHLNHLTDNLDCQWDDLFDKDGNEAPVQQSEFEDFSVTSHHENDDYTPAESYTAAHEDLYSHLKWQVDTFTWGTDIQQAIAYYLIDLIDEQGYLSSNLDQVIEAIKENEVFTPNEDDIETVLTLIQDNFEPAGVGARSIQECLLIQLKGMLPQTALIDTAIRMLSERFDWFAHGDFTRLKRVYGLDETSWIALMGLIQSLNPKPGLSFADSEREVIIPDLIIKRDKKGWKVELNPNAYPRVRVNNEYVDLLKHLDKSSRSQEQAEAMKEKLLEARGLIKSIQSRGETLLKVGAYLVAEQAKFLDEGDVAMKPLVLRDVADALGLHESTISRATTQKYMQTPRGTYELKYFFSSSVSQYGPQDQSAVAIKARIKQLIDAEDPKKPISDQDLVDKLETMKISVARRTVAKYREAMGIPSSSQRKVRR*