ggKbase home page

OR_08142018_10m_0_1um_scaffold_14782_3

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(473..1579)

Top 3 Functional Annotations

Value Algorithm Source
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 299
  • Evalue 4.00e-78
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JZD0_MARM1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 365.0
  • Bit_score: 287
  • Evalue 1.50e-74
tRNA (uracil-5-)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 365.0
  • Bit_score: 287
  • Evalue 4.10e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenovibrio marinus → Hydrogenovibrio → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
GCTGGAGTGGCGAAATTGACTTGCCAAGTCTTTCCCGAAATCTATCATGCGCAACTGAGTGAAAAAGTTGAGCGGGTAAAAAACTTGTTGAATTTGCCGCAGTCAATGCCGTTAACCGTGGCGGAGTCGGCAACCAGTCACTATCGTATGCGTGCCGAATTTCGCGTCTGGCACAAGGGTGATGAGTGGTTTTATGCCATGTTTGATGTGCAGAACAAGCGCCCGGTCTTTATTGAGCACTGTCCCATGGTGCATGAAGCCATTGCGACCTTAATGCAGCCTTTGCGGTCTCAATTATTGGCTCATGCTTTGCTGTCGCATAAGTTATATGCTATCGATTTTATGGCCAGTTCCGATGGTGAAGTGTTGGTGACACTGATTTACAAAACGCCACTAACAGATGAATGGCAAAAAGCGGCTGAGTCCTTGTCTTTGCCGGAAAAGGTAATGCTGATGGGACGCTCGCGTGGTAAGAAGCGGGTGTTGGTGCGTGATTATGTTGAGGAGCCGCTGCAACTCTCCTCTGGTGTTCGTATCCGCTTGCGTCATGTTGAAAATGCCTTTAGCCAGCCTAATGCCGGCATCAATCGGCAAATGCTTGATTGGGTGGATGATTTCTGGCGAAGCCAACCGCGAGCCTCGGCGTTATTAGAATTGTATGGTGGGGCAGGTAATTTTACCTGGGTATTGGCTCAGCACGCTGATGCTGTGGTGATGACCGAATTGTCGACGCAAGCGGTCGAAGCGGCACAGCAGGCATTTGTGCAAGCAAGACTCAGTCATGTGTCGATTGCTGCCATGGACAGTGCGGCTGTATCGGCTGCTTTATCAGAAACCTTAGCTTTGGGTACGCAATTCAGTTGGCAGGGGCGAGTGTATGATTTTGCCGGTATTTTAGTTGATCCGCCGCGTGCCGGTTTGGATGAGTTGACTAGAGCATTAACTCAGCGCTTTGATACCATCGTTTACATTTCGTGCAACCCCGAAACCCTAGCGAGAGATGTGCTTGCTTGGCAGGACACGCATCAGTTAGTCCGAGCTGCTGTGTTTGATCAGTTCCCTTATACCCATCACATTGAAGTTGGCGTGGTGTTGCAGCGAAAATGA
PROTEIN sequence
Length: 369
AGVAKLTCQVFPEIYHAQLSEKVERVKNLLNLPQSMPLTVAESATSHYRMRAEFRVWHKGDEWFYAMFDVQNKRPVFIEHCPMVHEAIATLMQPLRSQLLAHALLSHKLYAIDFMASSDGEVLVTLIYKTPLTDEWQKAAESLSLPEKVMLMGRSRGKKRVLVRDYVEEPLQLSSGVRIRLRHVENAFSQPNAGINRQMLDWVDDFWRSQPRASALLELYGGAGNFTWVLAQHADAVVMTELSTQAVEAAQQAFVQARLSHVSIAAMDSAAVSAALSETLALGTQFSWQGRVYDFAGILVDPPRAGLDELTRALTQRFDTIVYISCNPETLARDVLAWQDTHQLVRAAVFDQFPYTHHIEVGVVLQRK*