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OR_08142018_10m_0_1um_Thiotrichales_46_111

OR_08142018_10m_0_1um_Gammaproteobacteria_46_111

In projects: OR_08142018_10m_0_1um | mine_tailing_impoundment_time_series | SOB_across_mines

Consensus taxonomy: Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: OR_08142018_10m_0_1um_UNK

Properties

Avg. coverage: 110.74 Longest contig: 40.58 Kbp Bin length: 1.57 Mbp GC content: 46.15 %

Contigs count: 262 Features count: 1767 rRNAs count: 0 tRNAs count: 21

Genome completeness

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38

Displaying items 251-262 of 262 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
OR_08142018_10m_0_1um_scaffold_6958 Species: Shewanella baltica (50%)	2	2318 bp	45.51	80.37	100.17
OR_08142018_10m_0_1um_scaffold_2051 Order: Thiotrichales (50%)	6	5726 bp	48.17	106.04	100.18
OR_08142018_10m_0_1um_scaffold_29155 Species: Hydrogenovibrio marinus (50%)	2	1111 bp	50.68	76.15	100.18
OR_08142018_10m_0_1um_scaffold_7648 Order: Thiotrichales (66.67%)	3	2203 bp	48.89	81.09	100.23
OR_08142018_10m_0_1um_scaffold_24509 Species: Thiomicrospira crunogena (50%)	2	1218 bp	48.28	97.91	100.25
OR_08142018_10m_0_1um_scaffold_29161 Species: Candidatus Contendobacter odensis (50%)	2	1110 bp	52.43	87.97	100.27
OR_08142018_10m_0_1um_scaffold_29185 Species: Alteromonas sp. ALT199 (50%)	2	1110 bp	48.29	101.62	100.27
OR_08142018_10m_0_1um_scaffold_34793 Species: Thiomicrospira crunogena (50%)	2	1008 bp	48.02	78.13	100.30
OR_08142018_10m_0_1um_scaffold_18358 Species: Thioalkalimicrobium aerophilum (100%)	2	1415 bp	48.83	108.02	100.71
OR_08142018_10m_0_1um_scaffold_57668 Species: Thiobacillus prosperus (50%)	2	1286 bp	48.76	81.88	100.78
OR_08142018_10m_0_1um_scaffold_36937 Species: Thiothrix nivea (50%)	2	1513 bp	50.23	97.85	102.51
OR_08142018_10m_0_1um_scaffold_10406 Species: Thioalkalimicrobium aerophilum (50%)	2	2822 bp	46.17	109.55	103.33

Displaying items 251-262 of 262 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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