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RTP_02272018_0_2um_scaffold_798

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_798_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319..912)
DNA (594bp) protein (198aa)
Recombination protein RecR id=1320897 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
recR; recombination protein RecR
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_798_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(928..1254)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7504
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_798_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1446..3131)
DNA (1686bp) protein (562aa)
DNA polymerase subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Thiobacillus denitrificans RepID=UPI000382462D
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_798_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..4452)
DNA (1074bp) protein (358aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003721768
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_798_5
unknown

Not on your lists

comp(4533..4772)
DNA (240bp) protein (80aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_798_6
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4854..5771
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369B308
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
RTP_02272018_0_2um_scaffold_798_7

Not on your lists

5768..6322
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DEAB2
Uncharacterized protein {ECO:0000313|EMBL:CBH98118.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_798_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..8403)
DNA (1740bp) protein (580aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFS5_9PROT
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AJP49225.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
RTP_02272018_0_2um_scaffold_798_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..10334)
DNA (1554bp) protein (518aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFA6_9PROT
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:BAN34561.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_798_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10363..11823)
DNA (1461bp) protein (487aa)
Circadian clock protein KaiC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV1_9PROT
protein kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_798_11
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11816..12238)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI35_9PROT
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
RTP_02272018_0_2um_scaffold_798_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12470..13942)
DNA (1473bp) protein (491aa)
protease TldD n=1 Tax=Thiobacillus thioparus RepID=UPI00037C04CB
modulator of DNA gyrase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_798_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13962..14909)
DNA (948bp) protein (316aa)
Carbon-nitrogen hydrolase id=1320903 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carbon-nitrogen hydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_798_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14924..18733)
DNA (3810bp) protein (1270aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA749
Uncharacterized protein {ECO:0000313|EMBL:AAZ96463.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
RTP_02272018_0_2um_scaffold_798_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18813..19211)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3280
RNA-binding S4 protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_798_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19374..19943
DNA (570bp) protein (190aa)
FMN reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000370E382
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_798_17
unknown

Not on your lists

comp(19987..20652)
DNA (666bp) protein (222aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_798_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20892..22724)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361448D
serine protease
Serine protease, subtilase family {ECO:0000313|EMBL:AAZ96460.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_798_19
Plasmodium vivax, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

23116..23391
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Plasmodium vivax (strain Salvador I) RepID=A5JZ35_PLAVS
Uncharacterized protein {ECO:0000313|EMBL:EDL47246.1}; TaxID=126793 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="Plasmodium vivax (strain Salvador I).;"
hypothetical protein
Displaying 19 items

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