ggKbase home page

RTP_02272018_0_2um_scaffold_146_13

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(14024..14260)

Top 3 Functional Annotations

Value Algorithm Source
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12496288 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 78.0
  • Bit_score: 149
  • Evalue 7.70e-34
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 147
  • Evalue 1.40e-33
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 78.0
  • Bit_score: 151
  • Evalue 4.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGCTCGCGTATGTGTCGTAACGGGCAAAAAGCCCATGGTCGGAAACAACGTTTCCCACGCCAACAATAGAACCAAGCGTCGTTTTCTGCCCAACCTGCAATACCGCCGGTTCTGGGTTGAGAGCGAAAACCGCTGGATTCGTCTGCGTTTGTCCACCGCTGCCCTGCGCACGATCGACAAGAACGGCATTGATGCTGTTCTGGTTGACCTGCGCGCCAACGGCGTTGCCGTTTAA
PROTEIN sequence
Length: 79
MARVCVVTGKKPMVGNNVSHANNRTKRRFLPNLQYRRFWVESENRWIRLRLSTAALRTIDKNGIDAVLVDLRANGVAV*