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RTP_02272018_0_2um_scaffold_346_16

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(9714..10055)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003695264 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 111.0
  • Bit_score: 210
  • Evalue 5.30e-52
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 111.0
  • Bit_score: 202
  • Evalue 4.10e-50
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 109.0
  • Bit_score: 206
  • Evalue 1.80e-50

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAATTTGACGATTTCCGGTCATCACCTGGAAGTGACCCCAGCCATCCGCGACTATGTTTCCGACAAACTCGACCGCGTCAAGCGACACTTCGATCAGGTCATCAACGTGACTGTCATCATGCAAGTGGAAAAACTGGTCCACAAAGTGGAAGCCACCCTGCACGTCAAAGGCCATGACTTTCACGCCCGCAGTGAAGACGGCAATATGTATGCCGCCATCGATCTTCTGGCCGACAAGCTGGATCGCCAGATCGTCAAGCACAAGGAAAAAACCTCGGACGTCCACCAGGGCGACGGGGGGTTGAAACATCAGCCGTCGGAAAGCGTTGCCGAAGGCTGA
PROTEIN sequence
Length: 114
MNLTISGHHLEVTPAIRDYVSDKLDRVKRHFDQVINVTVIMQVEKLVHKVEATLHVKGHDFHARSEDGNMYAAIDLLADKLDRQIVKHKEKTSDVHQGDGGLKHQPSESVAEG*