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RTP_02272018_0_2um_scaffold_761_10

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 5428..7245

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 610.0
  • Bit_score: 899
  • Evalue 1.90e-258
FAD-dependent cmnm(5)s(2)U34 oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037927C2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 611.0
  • Bit_score: 956
  • Evalue 1.20e-275
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 610.0
  • Bit_score: 899
  • Evalue 3.80e-259

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGCTGAAAACCATCATCCCCGCCACGCTCGAATTCAAGGACGGCGTACCGTATTCCACCCGCTACGGCGATATCTACCATTCCGCCGACGGTGGCGCGGGGCAGGCGCGCCATGTTTTTTTGCAGGGTTGCGGCCTGCCTGCGGCGTGGGCGCATCGCACGGGCTTCGTCATCCTGGAAACGGGTTTCGGCGCCGGGCTGAATTTTCTGATGACCTGGGCCGCGTGGCGGGCAGACCCGGCGCGTCCCGCGCGGCTGCATGTTCTGTCGGTCGAGAAGCATCCGTTTCGCGCAGACGATCTGGCGACGCTACATGCGCAGTGGCCGGAATTCTCCGTGCTGTCACGTGAACTGCTGGCGAACTGGCCGATGTTGACGCCGGGCTTTCACCGCATCGCGCTCGATGGCGGGCGGGTGCAGCTCACCTTGATGCTGGGCGATGCGCTCGATTGCCTGCCGCAGGTGCAGGCTGGCGTGGATGCGTTTTATCTGGACGGCTTTGCGCCAGATTGCAATGCCGACCTGTGGCAGCCCGGCTTGTTTGACGAACTGGCGCGGCTGGCCAAACCGGGGGCGGTGGCGGCGACGTATAGCGTGATGGGTGCCGTGCGCCAGGGATTAAGCCAGGCGGGTTTTCAGTGCGAAAAGCGCGCGGGTTACGGCGGCAAGCGGCATTGTCTGACGGCGCATTTCGCGGGCGAATCCAGCTGGGTTGAGCCTGCTTTCCCCCGGCGGGTTGCCGTCATCGGCGCCGGGGTGGCGGGGGCAGCACTGGCGCATGCGCTGGCGCAACGGGGCGTGGCGGTCACGGTGCTGGAGCGTGGCGCGGAACTTGGCTCAGGCGCGTCGGGCAACCCGGTCGCGGTGTTCCGCCCGATGCTGTCGCGCGATGACACCCGTGCCAGCCGCCTGACGCGCGCGGCCTTTCTGCATAACCTGCGGGCGTGGGCGGCGTTGGGCGAAAGCGTGGAATGGTCGCGCTGCGGGGTGCTGCATCTGCCCAAGGATGAAGTCGCTGCGGCCAGGCAACAGCAGGCGCTCGTCAATGCCGCGCCGCCTGCTGAATTCGCGCGCTGGGTGGAACCGGGCGAAGCGTGCGAGCTAGCAAACTGGCCGGTTGATGCGCCCGGCCTGTTTTTCCCGGCGGCGGGCTGGGTGGTGCCGGGGACCTTATGCCGCGCCTGGCTCGATCATCCGGCCATAGCGTTAAGAATGGGTTGCACCGTTGCGCGGCTGCAAGCTGTCTCATCAGGCTGGCAGGTGCTCGATGGCGCAGGTGCGGTGTTGGTCGAGGCGGATGCCGTGGTGCTGGCGAACGCGTGCGATGCCTTGAGTCTGGTTCCCGATCAGGCCTGGCCGCTCCACACCGAGCGCGGGCAGATCACGCAGTTGCCGGCCGGCAGCCTGCCGGAAATCCGGCGGGTGATCGCACGCGAAGGCTATGTGGCGCCAGGCGCGTTTCAGCCGTTGGTGGGGGCAACCTATGAACACGATGACGACGACACCGCGCCGCGCCGGGACAGCGATCTTGCCAATCTGGCGCGGCTGGAAGCCATCTTGCCGGGCGCGGGGCATCGTTTCAATGTGGGCGATGTGATCGGCCGCGCTTCGCTGCGCGCGCTGCTCCCCGACCGGCTGCCGATGCTGGGTGCAGTCAGCGGCCAGGCGGGATTGTATGTGGCGGCGGGTTATGCCTCGCGCGGCGTGGTGTGGGCGGGGCTGCTGGGCGAGGCGCTGGCCGACCGGATGACCGGGCAGCCGTTGCCGCTGGAAGCCGAATTGATGCGGATTATCGCGCCGGGTCGCTTTACCCGCTGA
PROTEIN sequence
Length: 606
MLKTIIPATLEFKDGVPYSTRYGDIYHSADGGAGQARHVFLQGCGLPAAWAHRTGFVILETGFGAGLNFLMTWAAWRADPARPARLHVLSVEKHPFRADDLATLHAQWPEFSVLSRELLANWPMLTPGFHRIALDGGRVQLTLMLGDALDCLPQVQAGVDAFYLDGFAPDCNADLWQPGLFDELARLAKPGAVAATYSVMGAVRQGLSQAGFQCEKRAGYGGKRHCLTAHFAGESSWVEPAFPRRVAVIGAGVAGAALAHALAQRGVAVTVLERGAELGSGASGNPVAVFRPMLSRDDTRASRLTRAAFLHNLRAWAALGESVEWSRCGVLHLPKDEVAAARQQQALVNAAPPAEFARWVEPGEACELANWPVDAPGLFFPAAGWVVPGTLCRAWLDHPAIALRMGCTVARLQAVSSGWQVLDGAGAVLVEADAVVLANACDALSLVPDQAWPLHTERGQITQLPAGSLPEIRRVIAREGYVAPGAFQPLVGATYEHDDDDTAPRRDSDLANLARLEAILPGAGHRFNVGDVIGRASLRALLPDRLPMLGAVSGQAGLYVAAGYASRGVVWAGLLGEALADRMTGQPLPLEAELMRIIAPGRFTR*