ggKbase home page
Advanced Search
Search Help

RTP_02272018_0_2um_scaffold_579_27

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 24424..31152

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030FF45E similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 2244.0
  • Bit_score: 2473
  • Evalue 0.0
Conserved carbohydrate-binding protein {ECO:0000313|EMBL:CCH29475.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 1583.0
  • Bit_score: 1553
  • Evalue 0.0
Conserved carbohydrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 1583.0
  • Bit_score: 1553
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 6729
ATGAACAACAAGAACCCGAACAAGGGTAGTCTGGGCGTGCGCGTGCGTCGCCCGGGGGTCGCGTTAGTTTCTCTGGTCGGCATTGCGCTGGCTGCCCTGGCGGTTGCCAATCCTCTCTCCCTGGATGTCATCAAACACAGCCCTCTCCGGGTGCTTGTCGAGAGCGCAACGTCGCTGCCGCCTGAAGTCCAGGCACTCGAACAGCAAACTGCGGACCATGTTTTCGATCGCGATACCACCACCGAGCACACCGTTTACGACGCCTCGCAGATCACGGCGCAGTTAGAGGCTGCGACCGAAGTCCGCAGCATCAAGATATTTGGAGCGGCACCCTATTCGATCTCGGTTCAGGCAGAAGTAAGCGGCGGCTGGCAGGCCGTAAGCGGCTTGCAGAATCTGAATCTGGCCAGCCGGGCAGAAGCCTGGTCCACCTTTTCGGCCAGCACCCCCGTCACCACTTCAAAGCTTCGTTTTCAACTCGCACCCGTCGCAGGCAGTACCGCCACCGGCCTTAAAGCCATTGAAATATGGGGCAAGGGCGCCCGCGTCAACGTAAATGGCGGGTTGTCGCTACTGACGGCGCTGCGTGGCTCCACGCCGCCCACCCAGGGTCGGCTGGTTGCCGCCTCACCCGAGCAGGGCGTGATCGGCGGCACCACCGACGATCCAATCGACAACACTTTTACCTTTACGCTCAATCACGATCCGGCCCAATTCAAACGCGCCTACCTGGCGTATGAGGTGCTGGGTTTGTCGCATTGGGTCAGTGTCGTTCGCTCGGTCAACGGGCAGGCGCCACTGGGTGGTTTTACCCTGCCGACGGGCGCCGATTGGATAACGCAAGTCGAGCCTCTGGATCCCGCCGCGTTCAGGCGTGGCGACAACCGCATCGCGTTCAGTGTCCCGGCGGGCGTATCCAGCAGCTATACCGTACGCAAGGTGTATCTGGTGGCCGAACTTGAGAGCGGCGCCAACTTCGTTGTCTCGAGCGGGGCGAACCAGCCCGAAGAAGGCAACCCCACCAAGCATCTGCTGGATGGCAACCTGACGACAGGTTGGACGCCTTATCCTTCGGGCAATGTGCGTGCGGACATGCCGACAGTCAGTCTGGATTTCGATAAGCCCATTCAACTCGATGGCGTTTCGCTGTATCTGGTGAACACACTCAGAGGCTCGATTGCAGTCGATGTGCTGCGAGGCGGGGTCTGGAGCGCAACAGGCGTCACGATTGCAGATGCGCGCAAACTGGTGGCGGGCTGGAATAGCATCGCGTTGCCAGGCGCGGCACCGGTCGATGGGGTGCGGCTCGTGTTTGCAGGTGGACAGGGCAGCAGCGCAGAAATCAAGGAATTGCAGGCGAGCGGTTCGGGCGTGGGTCCGGCGTCTGCTTCCCGTTTTAGCATTGCCTACCCGGATGCGGGGCAGTATTTCGGGCGCTCCGCCTATATTCGCGGTTTCCTGCAACCCGCGGCCAACGCTTCCGGTGTAGCCCAGATATTCGCTGGCGCCACCGCCGTTCCGGCCAGCAACGGCTCATTCGACCTGACCATCACCAAGGACGATGTCGGTCTGGGTTCTACAGGCGACTCCGCGCCGTGGTCGGTCGATTTGCGCGCCGTCTATCCGGATGGCGCCACGGTCGTCAGCACCGTTACGCTCAACAATTATCAGCCGGCAGTGGAATCCGCCGATGGCAACCTGCTGCCCACCTACAAGTTCGCCGTTTCCCCGGGGCAGGCGAAGAAGCTCGCCTACGACGCCGCTGCGCTCGATCTGCCTGCCGACGCCGTCGGCAGCGAAATCAATATCGGCATCACGCCTTTGCCAGAGACAGAGGTGCCCGCGCTCGACACCGGCATGACCAACGTGACCAAGGGCCCGCGCCACGGCTACCGCTTCACGCCCACGCCGATGAAGTTCAAGAACAAGATCAAGGTGACCCTGCCTTACAACAAGGCGATGATCCCGCCGGGCCACACCGAAGACGACGTGCGTACGTTCTATTTCGACACCCAGTCGGGTTCCTGGAAGGCGCTCGAACGCGTGGCGGTGGATAAGCAGTCGCAGACATTGACCTCTTATACGGATCACTTCACCGACATGATCAATGCCACCGTCACGGTGCCGGATCATCCGCAGGGCGTGAATTTCAATCCGACGCTGATCAAGGATATCAAGGCTGCCGATCCAGGATCGCAGATCAATTTGATCGAGCCGCCGCAGGCCAACAACATGGGCGATGCGCGACTGGCCTATCCGCTAGAGGTGCCGCCAGGTCGCCAGGGCATGCAACCCCAGCTTGCAGTGCAATACAACTCGTCGGGCGGTAATGGCTGGATGGGATTGGGCTGGGATATTTCCATGCAGGCGATCACCATCGATACCCGATGGGGTGTGCCGCGCTATGACAGCGCGCTGGAAACCGAAACCTATCTGCTCAATGGCGAACAGCTCACCCCGGTCGCGCATCGTGGCGAACTTGTAGCACGCACCGCAGAAAAGGTCTTCCACGCCCGGGTTGAAGGACAATTCCGCAAGATCATTCGCCATGGCACCCATCCAAACAACTACTGGTGGGAAGTGCTCGACAAAAATGGCACTCGTTACATCTATGGCGGCGATCCCGTCACCAACCTGCCGACAGCGAATTCGACGCTGACCGACGACAGCGGCAACGTTTTCCTGTGGTCCTTGCGTGAGACGCGCGACACCAATGACAACTTCGTCAAATATCACAGCGAACGCGTTAGCGATGCGGGCGTCGCAGGCGGCACTGTGCCTGGCGTCAACCTCTATCTCAAGAAAATCACGTACACCGGACATGGCGTCACGGAAGGCGCTTATGCGGTCACTTTCCTGCGTGACCGCGAGTTGGGCGAAGCCCTGCGCACCGACAAGCAGATCGATGCGCGCGGCGCATTCAAGCGTGTCACCGCAGACCTGCTTCGCAAGGTGAATGTCACCTTCAACGGCCAGCCGGTTCGTTCGTACGAATTTCAATATGGCGTGGGCGCCTTCCACAAAACGCTGCTGCAGCGTGTGGTGCAGTTTGGCGAAAACGGCCTTGAGTTCAATCGCCACGCCTTTGATTACTACGATGAGGCGCGTGACACAGCGGGTAGTTACCGCGGCTTTGAAGCCTCGTCCGACTGGGGTATAGGCAGCGATGGCGTGAGCGCCGGCCTGTTCGGCAAGGGGGGCGCCAGCGCATTGGGCGGTTCCAAAGGTAGTAGTGCAGGCGGCCACCTGTATGTCGGCGTCGGGGTCGGTGGGAACGTTACCAGTAAGTCAGGTACGGTTGGTCCTAAGGTTGGTTACAGCCGCAGCAACAGCGATGCGCTCCTGGCCATGGCCGACATGAACGGCGATAGCCTGGCGGACAAGGTCTTCAAGGGTGCAGGTGGTTTTTATTATCGCCCCAACATGTCGGGTCCGCATGGGACGACTGGCTTCGGCTCGCCGGTTGCGCTCCCAAGTTTGCCAGCAGTGAACCGGGAAAAGGTTACCTCGACGACTCTGGGTATTGAGGCTTATTTCGGTGTTGTGGTGGCGGTTGACCGTAATCGGAGTGAGACCCAAACAGGCACATATCTTGGCGATGTCAACGGCGACGGCCTGACCGACCTGATCAGCGGTGGGCAGGTGTTGTTTGGCTACGTCAATGCGGCAGGAGTCCCCACATTCAGCGCCAACAGTTTGGATACGCCGGTTGCAATTGACAGTGGCGCCGTTGATACCGACGGCCTGCTTGAAGACGCAAGTGCGTTGGAAGCAGAGCGCGCCGCAGCTTTCCCGCTGCTCGATTCGCTACGTCGTTGGGTGGCGCCGTATGACGGTGTGGTGCAGATCAATGCCCCGGTACGCCTGATCCAGGACCTAAGTCCGGAAAGAGCCGAGTACACCGGTGCCGACGGCGTACGCGTGGCCATCCAGTTGGAAGGCGCGGAGCTTTGGTCCCAGTCCATTGCGGCTAACGATTACGCAACACATACCCCTGCAGGTTTGGCCACTGTGCCGGTGCAGCGCGGCGATCGCCTGTATTTCCGGGTGCAGTCGGTGTTTGACGGTGCGTATGACCAGGTAGCCTGGGATCCCGAAATTTCCTACACAGGTGCAGACTTGACCCGCACCGACGTCAACGGCCTGAAAGAGTATCGCTACCAGGCGTCGCAGGACTTCACTCTGGGCGGTCGTAGCGGCGCCATTGCCGCACCCTTGACTGGAACGCTTCGTCTGGCGGGGCAGTGGAAAAAAACGGCAGCCACCACGGATGACGTAACCCTGCTGATCACCAAGAATGGTGCGGATGTTTACCGTCGCGTCTTTGCGGCCACGGAAGTGGCGACGGTCGACTTGTCGGAGGATGTCGCGGTCACCCAGTTAGACGAGCTTAAGTGGAGCGTATTGATTGATTCGCCCATTGACGTCTCACGCATCCAATTCCAGCCGGTTGCTTACTATACGGCCGCAGATGGCGTGGATGGCCTCACTGACGAGCAAGGCAACTTTGTTATACGGGTTAACCCGCCCTACGGTGTGGATCTTTACCCGGCGAGCAATCTGACTTCGCCGCAAGCTAGCTATGTGGCGCCAGCGACGGGTACCTTGCCGGTGGAAGCCAAGCTTGTGCTGAGTGGGTTGGCAAATGGTGAAACGGCGTCAGCTGTGCTGACGGTGAAGCGCCCTGGCGGCTTGCTTGCCAAGCAAGCGATCAACGTCATAGGGACAGGCTCGCCCGTAGAAACCATCGTTAATCTCGACGTGCCCGTGGTGGTGGGAGATCAACTGTTCTTTGACGTGACATCGCGTCAAAGCACGTTTATATCGCAGATTAGCCAGCTCGAGATCAAGACCGGCGCGGTGATATTGCCGGCAGCCGCCCATGCGCCCGCTGCTGAAGAGTTGTTCCCGCAGCCCCACCGCGGTTGGGGTGCGGCAGGCTATGACGGCAATGATGTGCGCGCTACACAGCCTATCAATCAGTCCCTGCTGGTGCTGAATGAAACCTACGACCCGAATACCACGAAGGCGTACCCCTATCTGCCGATGTCCGAAGGCCAACTTTGGGGTGGTCTGGACGATATGGCGTGGGTCAAGGCGGGCGAGGCGAGTGCTTCGCGTTTGGGTCTTGACGACATTCGTGTACCGACTTCGGCTATGTTTGCGGGTTCGTCGGCCGTTCCGCGGTTGTCGCGTTCCACCAACGATTCCGCATCGATAGGTCTCGGCCCATTCAGCGGCGGCAGCACCACAGGCAAGAGCAAGAGCTTGCTGGACTTCCAGGATTTGAACGGCGACCGTTTTCCTGATGTGCTCGGCCAGGGGGGCGTTCAGTACACCCGTATGGTGGGCGGCCTTGAGGCAACCAAACGCGGCGGCGTGCTGGATACGGCACGTGTCAACAGCAACGAAAGCTCAAACCTGGGCGCAGGCGGCACCATCTCGCTTGCAATTGGCAACGGTAAAGGCAACGTTAATCCCTCGGGTGGCAGCCCGGCACAGACAGGTCAACAAGGCACCGACATGCCCAGTATCGGCTTCGGGGGCAACATCGGCAGCGGTAAATCCGATACTGACTTTGATCTGATCGATATCAACGGCGACGGCTTGCCGGACCGGGTGTACCAAAACGGTACTGCCGCGCTCAACCTTGGCTATGGCTTCGCTGCTGCCGAGCCCTGGAATGCCGGCATCGTCAACCATGGCGTGAGCGATAACGTTGGCGTCAATATGGGCTTCAACCTCAACTATTACAGTATTGCAGGCGGCCTCAATCTGGGCACCGGAACCTCGCGCAGCGAAGAAACCTATGTCGATATCAATGGCGACGGCTTGCCTGACAAGGTTATTGCCGGCAGTCCGTTGCAGGTGCGCCTGAATACCGGTGCGGGTTATGCTTCACCGATTGCCTGGCCGGGTGGCCATGGCAAAGTGGCAGTAGACAAACACATCACGCTTGGCGGCGGTGCTTACTTCACTTTTGGCTTTACCTTCTTTGGTGCAGCCAAAATTGTGATCAACCCAGGCGTTAATTTCTCTACAACCATGGGGCGTCCGGAGCTTGCCTTCCGCGACATCGACGGCGACGGCTATGCCGACCATCTGTTCTCGGAAAAAGACAGCGATCTGAAGGTTGCCCGCAACCCCATCGGGCGCACCAACCTGCTGAAATCGGTGCAACGTCCCTTGGGCGCGAAAGTTGACATCGAGTACCAACGTGACGGCAACACCTATGATCAGCCGCAGTCGCGCTGGGTGATGAACCAGGTCAAAGTGTTTGACGGCCATGTCGGCGACGGCGCGGACACGATGCTGACCACCTTCAAATACGAAGGCGGCAAGTACGACCGTCTGGAGCGCGACTTCTACGGCTACGGCAAAGTGGTCGAAGAGCAGCGCAATATCGCTGCTGGGAATGCGGTTTACCGTACGGTTGCGCAGGAGTTCCGTACCGACAGCTACTACACCAAAGGCCTGCTGGCGAAGTCCGTCACCGCCGACGCCACCGCCCGCCCCTACCTCGAAACCGAACAAACCTACGTCCTCAAGGACGTAGTCACCGGCGGCGCAGGGAATCCCACCAGCACCACTGCCACGATCTTCCCCGCGCTCACCCGCACCGACAATCGCTTCTACGAAGGCCAGCCCGTCGCCGGCAAGGCCACCCACACCCTGCACGACTACGATGCACTGGGCAACGTCACCCGCTTCTTCGATGCCGGTGATGTA
PROTEIN sequence
Length: 2243
MNNKNPNKGSLGVRVRRPGVALVSLVGIALAALAVANPLSLDVIKHSPLRVLVESATSLPPEVQALEQQTADHVFDRDTTTEHTVYDASQITAQLEAATEVRSIKIFGAAPYSISVQAEVSGGWQAVSGLQNLNLASRAEAWSTFSASTPVTTSKLRFQLAPVAGSTATGLKAIEIWGKGARVNVNGGLSLLTALRGSTPPTQGRLVAASPEQGVIGGTTDDPIDNTFTFTLNHDPAQFKRAYLAYEVLGLSHWVSVVRSVNGQAPLGGFTLPTGADWITQVEPLDPAAFRRGDNRIAFSVPAGVSSSYTVRKVYLVAELESGANFVVSSGANQPEEGNPTKHLLDGNLTTGWTPYPSGNVRADMPTVSLDFDKPIQLDGVSLYLVNTLRGSIAVDVLRGGVWSATGVTIADARKLVAGWNSIALPGAAPVDGVRLVFAGGQGSSAEIKELQASGSGVGPASASRFSIAYPDAGQYFGRSAYIRGFLQPAANASGVAQIFAGATAVPASNGSFDLTITKDDVGLGSTGDSAPWSVDLRAVYPDGATVVSTVTLNNYQPAVESADGNLLPTYKFAVSPGQAKKLAYDAAALDLPADAVGSEINIGITPLPETEVPALDTGMTNVTKGPRHGYRFTPTPMKFKNKIKVTLPYNKAMIPPGHTEDDVRTFYFDTQSGSWKALERVAVDKQSQTLTSYTDHFTDMINATVTVPDHPQGVNFNPTLIKDIKAADPGSQINLIEPPQANNMGDARLAYPLEVPPGRQGMQPQLAVQYNSSGGNGWMGLGWDISMQAITIDTRWGVPRYDSALETETYLLNGEQLTPVAHRGELVARTAEKVFHARVEGQFRKIIRHGTHPNNYWWEVLDKNGTRYIYGGDPVTNLPTANSTLTDDSGNVFLWSLRETRDTNDNFVKYHSERVSDAGVAGGTVPGVNLYLKKITYTGHGVTEGAYAVTFLRDRELGEALRTDKQIDARGAFKRVTADLLRKVNVTFNGQPVRSYEFQYGVGAFHKTLLQRVVQFGENGLEFNRHAFDYYDEARDTAGSYRGFEASSDWGIGSDGVSAGLFGKGGASALGGSKGSSAGGHLYVGVGVGGNVTSKSGTVGPKVGYSRSNSDALLAMADMNGDSLADKVFKGAGGFYYRPNMSGPHGTTGFGSPVALPSLPAVNREKVTSTTLGIEAYFGVVVAVDRNRSETQTGTYLGDVNGDGLTDLISGGQVLFGYVNAAGVPTFSANSLDTPVAIDSGAVDTDGLLEDASALEAERAAAFPLLDSLRRWVAPYDGVVQINAPVRLIQDLSPERAEYTGADGVRVAIQLEGAELWSQSIAANDYATHTPAGLATVPVQRGDRLYFRVQSVFDGAYDQVAWDPEISYTGADLTRTDVNGLKEYRYQASQDFTLGGRSGAIAAPLTGTLRLAGQWKKTAATTDDVTLLITKNGADVYRRVFAATEVATVDLSEDVAVTQLDELKWSVLIDSPIDVSRIQFQPVAYYTAADGVDGLTDEQGNFVIRVNPPYGVDLYPASNLTSPQASYVAPATGTLPVEAKLVLSGLANGETASAVLTVKRPGGLLAKQAINVIGTGSPVETIVNLDVPVVVGDQLFFDVTSRQSTFISQISQLEIKTGAVILPAAAHAPAAEELFPQPHRGWGAAGYDGNDVRATQPINQSLLVLNETYDPNTTKAYPYLPMSEGQLWGGLDDMAWVKAGEASASRLGLDDIRVPTSAMFAGSSAVPRLSRSTNDSASIGLGPFSGGSTTGKSKSLLDFQDLNGDRFPDVLGQGGVQYTRMVGGLEATKRGGVLDTARVNSNESSNLGAGGTISLAIGNGKGNVNPSGGSPAQTGQQGTDMPSIGFGGNIGSGKSDTDFDLIDINGDGLPDRVYQNGTAALNLGYGFAAAEPWNAGIVNHGVSDNVGVNMGFNLNYYSIAGGLNLGTGTSRSEETYVDINGDGLPDKVIAGSPLQVRLNTGAGYASPIAWPGGHGKVAVDKHITLGGGAYFTFGFTFFGAAKIVINPGVNFSTTMGRPELAFRDIDGDGYADHLFSEKDSDLKVARNPIGRTNLLKSVQRPLGAKVDIEYQRDGNTYDQPQSRWVMNQVKVFDGHVGDGADTMLTTFKYEGGKYDRLERDFYGYGKVVEEQRNIAAGNAVYRTVAQEFRTDSYYTKGLLAKSVTADATARPYLETEQTYVLKDVVTGGAGNPTSTTATIFPALTRTDNRFYEGQPVAGKATHTLHDYDALGNVTRFFDAGDV